new_contents: import sys
  import os
  import subprocess
  import json
  from scipy import stats
  from argparse import ArgumentParser
  
  parser = ArgumentParser(description="Get Ideogram.js annotations for an SRR")
  parser.add_argument("--acc", required=True, help="SRR accession")
  args = parser.parse_args()
  
  acc = args.acc
  out = acc + "_counts"
  
  os.chdir("counting")
  
  subprocess.call(["python", "counter.py", "--inp", acc, "--out", out])
  
  os.chdir("../formatter")
  subprocess.call([
      "python", "formatter.py", "--type", "srr", "--lookup", "gene_lookup_GRCh37.tsv", 
      "--inp", "../counting/" + out + "_norm.tsv", "--out", acc + ".json"
  ])
  
  
subject: Add draft of wrapper script