new_contents: import sys
  import json
  
  
  def make_file(ont_json_file, fname):
      with open(ont_json_file, 'r') as fh:
          ont_json = json.load(fh)
      rows = []
      for top_key, entries in ont_json.items():
          for entry_key, examples in entries.items():
              entry_str = '%s/%s' % (top_key, entry_key)
              examples_str = '%s' % (','.join(examples))
              row = '%s\t%s' % (entry_str, examples_str)
              rows.append(row)
  
      with open(fname, 'w') as fh:
          fh.write('\n'.join(rows))
  
  
  if __name__ == '__main__':
      ont_json_file = sys.argv[1]
      fname = 'sofia_ontology_examples.tsv'
      make_file(ont_json_file, fname)
  
subject: Make SOFIA TSV for ontology mapping