old_contents: ############################################################################
  ## Project config
  
  import hgvs
  version = hgvs.__version__
  release = str(hgvs.__version__)
  
  project = u'HGVS'
  authors = project + ' Contributors'
  copyright = u'2015, ' + authors
  
  extlinks = {
      'issue': ('https://bitbucket.org/biocommons/hgvs/issue/%s', 'issue '),
      }
  
  man_pages = [
      ('index', project, project + u' Documentation', [project + u' Contributors'], 1)
  ]
  
  ############################################################################
  ## Boilerplate
  
  autodoc_default_flags = ['members', 'undoc-members', 'show-inheritance'] #, 'inherited-members']
  autoclass_content = 'both'
  exclude_patterns = ['build','static','templates','themes']
  extensions = [
      'sphinx.ext.autodoc',
      'sphinx.ext.autosummary',
      'sphinx.ext.coverage',
      'sphinx.ext.extlinks',
      'sphinx.ext.intersphinx',
      'sphinx.ext.pngmath',
      'sphinx.ext.todo',
      'sphinx.ext.viewcode',
      'sphinxcontrib.fulltoc',
      ]
  html_favicon = 'static/favicon.ico'
  html_logo = 'static/logo.svg'
  html_static_path = ['static']
  html_title = '{project} {release}'.format(project = project, release = release)
  intersphinx_mapping = {
      'http://docs.python.org/': None,
      }
  master_doc = 'index'
  pygments_style = 'sphinx'
  source_suffix = '.rst'
  templates_path = ['templates']
  
  ## <LICENSE>
  ## Copyright 2014 HGVS Contributors (https://bitbucket.org/biocommons/hgvs)
  ## 
  ## Licensed under the Apache License, Version 2.0 (the "License");
  ## you may not use this file except in compliance with the License.
  ## You may obtain a copy of the License at
  ## 
  ##     http://www.apache.org/licenses/LICENSE-2.0
  ## 
  ## Unless required by applicable law or agreed to in writing, software
  ## distributed under the License is distributed on an "AS IS" BASIS,
  ## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ## See the License for the specific language governing permissions and
  ## limitations under the License.
  ## </LICENSE>
  
new_contents: ############################################################################
  ## Project config
  
  import hgvs
  version = hgvs.__version__
  release = str(hgvs.__version__)
  
  project = u'HGVS'
  authors = project + ' Contributors'
  copyright = u'2015, ' + authors
  
  extlinks = {
      'issue': ('https://bitbucket.org/biocommons/hgvs/issue/%s', 'issue '),
      }
  
  man_pages = [
      ('index', project, project + u' Documentation', [project + u' Contributors'], 1)
  ]
  
  ############################################################################
  ## Boilerplate
  
  autodoc_default_flags = ['members', 'undoc-members', 'show-inheritance'] #, 'inherited-members']
  autoclass_content = 'both'
  exclude_patterns = ['build','static','templates','themes']
  extensions = [
      'sphinx.ext.autodoc',
      'sphinx.ext.autosummary',
      'sphinx.ext.coverage',
      'sphinx.ext.extlinks',
      'sphinx.ext.intersphinx',
      'sphinx.ext.pngmath',
      'sphinx.ext.todo',
      'sphinx.ext.viewcode',
      ]
  html_favicon = 'static/favicon.ico'
  html_logo = 'static/logo.svg'
  html_static_path = ['static']
  html_title = '{project} {release}'.format(project = project, release = release)
  intersphinx_mapping = {
      'http://docs.python.org/': None,
      }
  master_doc = 'index'
  pygments_style = 'sphinx'
  source_suffix = '.rst'
  templates_path = ['templates']
  
  ## <LICENSE>
  ## Copyright 2014 HGVS Contributors (https://bitbucket.org/biocommons/hgvs)
  ## 
  ## Licensed under the Apache License, Version 2.0 (the "License");
  ## you may not use this file except in compliance with the License.
  ## You may obtain a copy of the License at
  ## 
  ##     http://www.apache.org/licenses/LICENSE-2.0
  ## 
  ## Unless required by applicable law or agreed to in writing, software
  ## distributed under the License is distributed on an "AS IS" BASIS,
  ## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ## See the License for the specific language governing permissions and
  ## limitations under the License.
  ## </LICENSE>
  
subject: remove fulltoc from doc/conf.py