old_contents: from setuptools import setup, find_packages
  
  setup(
      name = 'CorrelatedVariants',
      version = '0.1.0',
      author = 'Pacific Biosciences',
      author_email = 'devnet@pacificbiosciences.com',
      license = open('LICENSE.txt').read(),
      packages = find_packages('.'),
      package_dir = {'':'.'},
      zip_safe = False,
      scripts=[
          'bin/correlatedVariants',
          'bin/rareCaller'
      ],
      install_requires = [
          'pbcore >= 0.2',
          'numpy >= 1.6.0',
          'scipy >= 0.9.0',
          'h5py >= 1.3.0'
      ]
  )
  
new_contents: from setuptools import setup, find_packages
  
  setup(
      name = 'CorrelatedVariants',
      version = '0.1.0',
      author = 'Pacific Biosciences',
      author_email = 'devnet@pacificbiosciences.com',
      license = open('LICENSE.txt').read(),
      packages = find_packages('.'),
      package_dir = {'':'.'},
      zip_safe = False,
      scripts=[
          'bin/correlatedVariants',
          'bin/rareCaller'
      ],
      install_requires = [
          'pbcore >= 0.2',
          'GenomicConsensus',
          'numpy >= 1.6.0',
          'scipy >= 0.9.0',
          'h5py >= 1.3.0'
      ]
  )
  
subject: Add undeclared dependency on GenomicConsensus