old_contents: #!/usr/bin/env python
  
  from distutils.core import setup
  
  setup(
      name='methpat',
      version='1.3.0',
      author='Bernie Pope',
      author_email='bjpope@unimelb.edu.au',
      packages=['methpat'],
      scripts=['methpat/out_to_vis_csv.py'],
      entry_points={
          'console_scripts': ['methpat = methpat.methpat:main']
      },
      url='https://github.com/bjpop/methpat',
      license='LICENSE.txt',
      description=(
          'This program summarises the resultant DNA methylation '
          'pattern data from the output of bismark_methylation_extractor.'),
      long_description=(
          'This program summarises the resultant DNA methylation '
          'pattern data from the output of bismark_methylation_extractor. '
          'Information of the DNA methylation positions for each amplicon, '
          'DNA methylation patterns observed within each amplicon and their '
          'abundance counts are summarised into a tab delimited text file '
          'amenable for further downstream statistical analysis and visualization.'),
      install_requires=[],
  )
  
new_contents: #!/usr/bin/env python
  
  from distutils.core import setup
  
  setup(
      name='methpat',
      version='1.4.0',
      author='Bernie Pope',
      author_email='bjpope@unimelb.edu.au',
      packages=['methpat'],
      scripts=['methpat/out_to_vis_csv.py'],
      entry_points={
          'console_scripts': ['methpat = methpat.methpat:main']
      },
      url='https://github.com/bjpop/methpat',
      license='LICENSE.txt',
      description=(
          'This program summarises the resultant DNA methylation '
          'pattern data from the output of bismark_methylation_extractor.'),
      long_description=(
          'This program summarises the resultant DNA methylation '
          'pattern data from the output of bismark_methylation_extractor. '
          'Information of the DNA methylation positions for each amplicon, '
          'DNA methylation patterns observed within each amplicon and their '
          'abundance counts are summarised into a tab delimited text file '
          'amenable for further downstream statistical analysis and visualization.'),
      install_requires=[],
  )
  
subject: Increment minor version number