new_contents: import os
  import sys
  from subprocess import Popen, PIPE
  
  # --------------------------------------------------------------------------------------------------
  
  def get_job_run_time(lsf_output_file, time='s'):
  	"""
  	"""
  
  	fp = open(lsf_output_file, 'r')
  	process = Popen(['grep', 'Run time', lsf_output_file], stdin=PIPE, stdout=PIPE, stderr=PIPE)
  	output, err = process.communicate()
  	
  	run_time = int(output.split(" ")[-2])	
  
  	if time == 'm':
  		run_time = run_time/60	
  
  	return run_time
  
  # --------------------------------------------------------------------------------------------------
  	
  def get_job_max_used_memory(lsf_output_file):
  	"""
  	"""
  	fp = open(lsf_output_file, 'r')
          process = Popen(['grep', 'Max Memory', lsf_output_file], stdin=PIPE, stdout=PIPE, stderr=PIPE)
          output, err = process.communicate()
  
          max_memory = int(output.split(" ")[-2])
  
  	return max_memory
  
  # --------------------------------------------------------------------------------------------------
  
  if __name__ == '__main__':
  
  	source_dir = sys.argv[1]
  	families = [x for x in os.listdir(source_dir) if os.path.isdir(os.path.join(source_dir, x))]
  
  	for family in families:
  		family_dir = (os.path.join(source_dir, family))
  		lsf_output_file = os.path.join(family_dir, "auto_rfsearch.out")
  		run_time = get_job_run_time(lsf_output_file, time='m')
  		memory = get_job_max_used_memory(lsf_output_file)
   
  		print "%s\t%s\t%s" % (family, run_time, memory)
  
  
subject: Add script to extract useful lsf job information