old_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  
  from setuptools import setup, Extension
  from Cython.Build import cythonize
  
  extensions = [
      Extension("pyemto.c.c_lattice", ["pyemto/c/c_lattice.pyx"],
                #include_dirs = [...],
                #libraries = [...],
                #library_dirs = [...],
                )
  ]
  
  setup(name='pyemto',
        version='0.9.3',
        description='Program to generate input files for EMTO program',
        author='H. Levämäki, M. Ropo',
        author_email='hpleva@utu.fi, matti.ropo@tut.fi',
        license='MIT',
        classifiers=['Development Status :: 4 - Beta', 'Environment :: Console',
                     'Intended Audience :: Science/Research'],
        packages=['pyemto', 'pyemto.EOS', 'pyemto.emtoinputs',
                  'pyemto.latticeinputs', 'pyemto.utilities',
                  'pyemto.common', 'pyemto.emto_parser',
                  'pyemto.examples', 'pyemto.free_energy',
                  'pyemto.space_group', 'pyemto.c'],
        package_data={"pyemto.emto_parser": ["*.json", "LICENSE.txt"],
                      "pyemto": ["contributors.txt", "Documentation.html"],
                      "pyemto.c": ["*.py", "*.so", "*.pyc"]},
        install_requires=["numpy>=1.10.3", "scipy>=0.17.1", "matplotlib>=1.5.1"],
        extras_require={"emto_parser": ["pandas>=0.20.3"],
                        "emto_input_generator": ["pymatgen>=4.4.0"]},
        ext_modules = cythonize(extensions),
        )
  
new_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  
  from setuptools import setup, Extension
  from Cython.Build import cythonize
  import numpy
  
  extensions = [
      Extension("pyemto.c.c_lattice", ["pyemto/c/c_lattice.pyx"],
                include_dirs = [numpy.get_include()],
                #libraries = [...],
                #library_dirs = [...],
                )
  ]
  
  setup(name='pyemto',
        version='0.9.3',
        description='Program to generate input files for EMTO program',
        author='H. Levämäki, M. Ropo',
        author_email='hpleva@utu.fi, matti.ropo@tut.fi',
        license='MIT',
        classifiers=['Development Status :: 4 - Beta', 'Environment :: Console',
                     'Intended Audience :: Science/Research'],
        packages=['pyemto', 'pyemto.EOS', 'pyemto.emtoinputs',
                  'pyemto.latticeinputs', 'pyemto.utilities',
                  'pyemto.common', 'pyemto.emto_parser',
                  'pyemto.examples', 'pyemto.free_energy',
                  'pyemto.space_group', 'pyemto.c'],
        package_data={"pyemto.emto_parser": ["*.json", "LICENSE.txt"],
                      "pyemto": ["contributors.txt", "Documentation.html"],
                      "pyemto.c": ["*.py", "*.so", "*.pyc"]},
        install_requires=["numpy>=1.10.3", "scipy>=0.17.1", "matplotlib>=1.5.1"],
        extras_require={"emto_parser": ["pandas>=0.20.3"],
                        "emto_input_generator": ["pymatgen>=4.4.0"]},
        ext_modules = cythonize(extensions),
        )
  
subject: Fix setup.py