old_contents: '''
  Created on 27 May 2016
  
  @author: steve
  '''
  from setuptools import setup
  
  setup(name='scram',
        version='0.5',
        description=' Small Complementary RnA Mapper',
        url='https://github.com/Carroll-Lab/scram',
        author='Stephen Fletcher',
        author_email='s.fletcher@uq.edu.au',
        license='MIT',
        packages=['scram_modules'],
        classifiers=[
      # How mature is this project? Common values are
      #   3 - Alpha
      #   4 - Beta
      #   5 - Production/Stable
      'Development Status :: 4 - Beta',
      'Intended Audience :: Science/Research',
      # Indicate who your project is intended for
  
      'Topic :: Scientific/Engineering :: Bio-Informatics',
  
      # Pick your license as you wish (should match "license" above)
       'License :: OSI Approved :: MIT License',
  
      # Specify the Python versions you support here. In particular, ensure
      # that you indicate whether you support Python 2, Python 3 or both.
      'Programming Language :: Python :: 2.7'],
        install_requires=['numpy','matplotlib'],
        scripts=['scram_modules/scram',
        'scram_modules/analysis.py',
        'scram_modules/align_srna.py',
        'scram_modules/analysis_helper.py',
        'scram_modules/cdp.py',
        'scram_modules/den.py',
        'scram_modules/dna.py',
        'scram_modules/plot_reads.py',
        'scram_modules/post_process.py',
        'scram_modules/ref_seq.py',
        'scram_modules/srna_seq.py',
        'scram_modules/write_to_file.py',
        ],
        zip_safe=False)
new_contents: '''
  Created on 27 May 2016
  
  @author: steve
  '''
  from setuptools import setup
  
  setup(name='scram',
        version='0.5.0',
        description=' Small Complementary RnA Mapper',
        url='https://github.com/Carroll-Lab/scram',
        author='Stephen Fletcher',
        author_email='s.fletcher@uq.edu.au',
        license='MIT',
        packages=['scram_modules'],
        classifiers=[
      # How mature is this project? Common values are
      #   3 - Alpha
      #   4 - Beta
      #   5 - Production/Stable
      'Development Status :: 4 - Beta',
      'Intended Audience :: Science/Research',
      # Indicate who your project is intended for
  
      'Topic :: Scientific/Engineering :: Bio-Informatics',
  
      # Pick your license as you wish (should match "license" above)
       'License :: OSI Approved :: MIT License',
  
      # Specify the Python versions you support here. In particular, ensure
      # that you indicate whether you support Python 2, Python 3 or both.
      'Programming Language :: Python :: 2.7'],
        install_requires=['numpy','matplotlib'],
        scripts=['scram_modules/scram',
        'scram_modules/analysis.py',
        'scram_modules/align_srna.py',
        'scram_modules/analysis_helper.py',
        'scram_modules/cdp.py',
        'scram_modules/den.py',
        'scram_modules/dna.py',
        'scram_modules/plot_reads.py',
        'scram_modules/post_process.py',
        'scram_modules/ref_seq.py',
        'scram_modules/srna_seq.py',
        'scram_modules/write_to_file.py',
        ],
        zip_safe=False)
subject: Update setup.py with new version number