old_contents: #!/usr/bin/env python
  # ----------------------------------------------------------------------------
  # Copyright (c) 2016--, Biota Technology.
  #
  # Distributed under the terms of the Modified BSD License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # ----------------------------------------------------------------------------
  
  from setuptools import find_packages, setup
  
  __version__ = '2.0.0-dev'
  
  classes = """
      Development Status :: 1 - Planning
      Intended Audience :: Science/Research
      Natural Language :: English
      Operating System :: MacOS :: MacOS X
      Operating System :: POSIX
      Operating System :: Unix
      Programming Language :: Python
      Programming Language :: Python :: 2.7
      Programming Language :: Python :: 3.5
      Topic :: Scientific/Engineering
      Topic :: Scientific/Engineering :: Bio-Informatics
  """
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  description = "Python implementation of the SourceTracker R package."
  
  setup(
      name='sourcetracker2',
      version=__version__,
      license='proprietary',
      description=description,
      long_description=description,
      author='Biota Technology',
      author_email='will@biota.com',
      maintainer='Will Van Treuren',
      maintainer_email='will@biota.com',
      url='http://www.biota.com',
      test_suite='nose.collector',
      packages=find_packages(),
      install_requires=['numpy', 'h5py', 'biom-format >= 2.1.5, < 2.2.0',
                        'click', 'ipyparallel'],
      classifiers=classifiers,
      entry_points='''
          [console_scripts]
          sourcetracker2=sourcetracker.cli:cli
          ''')
  
new_contents: #!/usr/bin/env python
  # ----------------------------------------------------------------------------
  # Copyright (c) 2016--, Biota Technology.
  #
  # Distributed under the terms of the Modified BSD License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # ----------------------------------------------------------------------------
  
  from setuptools import find_packages, setup
  
  __version__ = '2.0.0-dev'
  
  classes = """
      Development Status :: 1 - Planning
      Intended Audience :: Science/Research
      Natural Language :: English
      Operating System :: MacOS :: MacOS X
      Operating System :: POSIX
      Operating System :: Unix
      Programming Language :: Python
      Programming Language :: Python :: 3.5
      Topic :: Scientific/Engineering
      Topic :: Scientific/Engineering :: Bio-Informatics
  """
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  description = "Python implementation of the SourceTracker R package."
  
  setup(
      name='sourcetracker2',
      version=__version__,
      license='modified BSD',
      description=description,
      long_description=description,
      author='Biota Technology',
      author_email='will@biota.com',
      maintainer='Will Van Treuren',
      maintainer_email='will@biota.com',
      url='http://www.biota.com',
      test_suite='nose.collector',
      packages=find_packages(),
      install_requires=['numpy', 'h5py', 'biom-format >= 2.1.5, < 2.2.0',
                        'click', 'ipyparallel', 'scikit-bio == 0.4.0'],
      classifiers=classifiers,
      entry_points='''
          [console_scripts]
          sourcetracker2=sourcetracker.cli:cli
          ''')
  
subject: Update setup.py