old_contents: from setuptools import setup, find_packages
  import sys, os
  
  PACKAGE = 'mtdna'
  
  VERSION = open(os.path.join(os.path.dirname(os.path.realpath(__file__)),'oldowan', PACKAGE, 'VERSION')).read().strip()
  
  desc_lines = open('README', 'r').readlines()
  
  setup(name='oldowan.%s' % PACKAGE,
        version=VERSION,
        description=desc_lines[0],
        long_description=''.join(desc_lines[2:]),
        classifiers=[
            "Development Status :: 5 - Production/Stable",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: MIT License",
            "Operating System :: OS Independent",
            "Programming Language :: Python",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
        ],
        keywords='',
        platforms=['Any'],
        author='Ryan Raaum',
        author_email='code@raaum.org',
        url='http://www.raaum.org/software/oldowan',
        license='MIT',
        packages=find_packages(exclude=['ez_setup', 'examples', 'tests']),
        include_package_data=False,
        namespace_packages = ['oldowan'],
        data_files=[("oldowan/%s" % PACKAGE, ["oldowan/%s/VERSION" % PACKAGE])],
        zip_safe=False,
        test_suite = 'nose.collector',
        )
  
new_contents: from setuptools import setup, find_packages
  import sys, os
  
  PACKAGE = 'mtdna'
  
  VERSION = open(os.path.join(os.path.dirname(os.path.realpath(__file__)),'oldowan', PACKAGE, 'VERSION')).read().strip()
  
  desc_lines = open('README', 'r').readlines()
  
  setup(name='oldowan.%s' % PACKAGE,
        version=VERSION,
        description=desc_lines[0],
        long_description=''.join(desc_lines[2:]),
        classifiers=[
            "Development Status :: 5 - Production/Stable",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: MIT License",
            "Operating System :: OS Independent",
            "Programming Language :: Python",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
        ],
        keywords='',
        platforms=['Any'],
        author='Ryan Raaum',
        author_email='code@raaum.org',
        url='http://www.raaum.org/software/oldowan',
        license='MIT',
        packages=find_packages(exclude=['ez_setup', 'examples', 'tests']),
        include_package_data=True,
        namespace_packages = ['oldowan'],
        data_files=[("oldowan/%s" % PACKAGE, ["oldowan/%s/VERSION" % PACKAGE])],
        zip_safe=False,
        test_suite = 'nose.collector',
        )
  
subject: Fix package data so that VERSION file actually gets installed