old_contents: #!/usr/bin/env python
  
  from setuptools import setup
  
  setup(
      name='svpipeline',
      version='0.1',
      author='Khalid Mahmood',
      author_email='khalid.mahmood@unimelb.edu.au',
      packages=['src'],
      entry_points={
          'console_scripts': ['svpipeline = src.main:main']
      },
      url='https://github.com/khalidm/svpipeline',
      license='LICENSE.txt',
      description='svpipeline is a bioinformatics pipeline to call structural \
       variants.',
      long_description=open('README.md').read(),
      install_requires=[
          "ruffus == 2.6.3",
          "drmaa == 0.7.6",
          "PyYAML == 3.11"
      ],
  )
  
new_contents: #!/usr/bin/env python
  
  from setuptools import setup
  
  setup(
      name='svpipeline',
      version='0.1',
      author='Khalid Mahmood',
      author_email='khalid.mahmood@unimelb.edu.au',
      packages=['src'],
      entry_points={
          'console_scripts': ['svpipeline = src.main:main']
      },
      url='https://github.com/khalidm/svpipeline',
      license='LICENSE.txt',
      description='svpipeline is a bioinformatics pipeline to call structural \
       variants.',
      long_description=open('README.md').read(),
      install_requires=[
          "ruffus == 2.6.3",
          "drmaa == 0.7.6",
          "PyYAML >= 4.2b1"
      ],
  )
  
subject: Update setup.py