old_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  from setuptools import setup
  import os
  import subprocess
  from setuptools.command import easy_install
  
  
  __version__ = '1.0.7'
  
  
  def parse_requirements(filename):
      return [
          line.strip()
          for line in open(filename).readlines()
          if (line.strip())[0] != '#'
      ]
  
  
  requirements = parse_requirements('requirements.txt')
  
  
  def get_long_description():
      readme_file = 'README.md'
      if not os.path.isfile(readme_file):
          return ''
      # Try to transform the README from Markdown to reStructuredText.
      try:
          easy_install.main(['-U', 'pyandoc==0.0.1'])
          import pandoc
          pandoc.core.PANDOC_PATH = 'pandoc'
          doc = pandoc.Document()
          doc.markdown = open(readme_file).read()
          description = doc.rst
      except Exception:
          description = open(readme_file).read()
      return description
  
  
  setup(
      name='amphipathic',
      version=__version__,
      author=u'Eloy Adonis Colell',
      author_email='eloy.colell@gmail.com',
      packages=['amphipathic', 'amphipathic.hydrophobic', 'amphipathic.hydrophobic.data'],
      url='https://github.com/ecolell/amphipathic',
      license='MIT',
      description=('This is a library to evaluate an aminoacid sequence and '
                   'determine an amphipathic index for each alpha helix or '
                   'beta sheet.'),
      long_description=get_long_description(),
      long_description_content_type="text/markdown",
      zip_safe=True,
      install_requires=requirements,
      classifiers=[
          "Intended Audience :: Science/Research",
          "Programming Language :: Python",
          "Programming Language :: Python :: 3.6",
          "Topic :: Scientific/Engineering :: Bio-Informatics",
          "Topic :: Scientific/Engineering :: Information Analysis",
          "Topic :: Scientific/Engineering :: Physics",
      ],
  )
  
new_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  from setuptools import setup
  import os
  import subprocess
  from setuptools.command import easy_install
  
  
  __version__ = '1.0.7'
  
  
  def parse_requirements(filename):
      return [
          line.strip()
          for line in open(filename).readlines()
          if (line.strip())[0] != '#'
      ]
  
  
  requirements = parse_requirements('requirements.txt')
  
  
  def get_long_description():
      readme_file = 'README.md'
      if not os.path.isfile(readme_file):
          return ''
      # Try to transform the README from Markdown to reStructuredText.
      try:
          easy_install.main(['-U', 'pyandoc==0.0.1'])
          import pandoc
          pandoc.core.PANDOC_PATH = 'pandoc'
          doc = pandoc.Document()
          doc.markdown = open(readme_file).read()
          description = doc.rst
      except Exception:
          description = open(readme_file).read()
      return description
  
  
  setup(
      name='amphipathic',
      version=__version__,
      author=u'Eloy Adonis Colell',
      author_email='eloy.colell@gmail.com',
      packages=['amphipathic', 'amphipathic.hydrophobic', 'amphipathic.hydrophobic.data'],
      url='https://github.com/ecolell/amphipathic',
      license='MIT',
      description=('This is a library to evaluate an aminoacid sequence and '
                   'determine an amphipathic index for each alpha helix or '
                   'beta sheet.'),
      long_description=get_long_description(),
      long_description_content_type="text/markdown",
      zip_safe=True,
      install_requires=requirements,
      classifiers=[
          "Intended Audience :: Science/Research",
          "Programming Language :: Python",
          "Programming Language :: Python :: 3.6",
          "Topic :: Scientific/Engineering :: Bio-Informatics",
          "Topic :: Scientific/Engineering :: Information Analysis",
          "Topic :: Scientific/Engineering :: Physics",
      ],
      include_package_data=True,
  )
  
subject: Include data files.