old_contents: 
  '''
  Extracts info from the CLEAN logs in separate channels.
  '''
  
  import sys
  import glob
  import os
  import numpy as np
  
  # from casa_tools import collect_clean_results
  execfile("/home/eric/Dropbox/code_development/VLA_Lband/CASA_tools/casa_tools/extract_from_log.py")
  
  
  path_to_results = sys.argv[1]
  output_filename = sys.argv[2] if sys.argv[2] != "None" else None
  show_in_browser = True if sys.argv[3] == "True" else False
  
  # In this case, each results is within it's own directory
  # ie. path_to_results/channel_$i/
  channel_direcs = glob.glob(os.path.join(path_to_results, "channel_*"))
  
  # Sort by the channel number
  min_chan = 10000
  max_chan = 0
  
  for channel in channel_direcs:
      # Last 3 characters
      chan_num = int(channel.split("_")[-1])
      if chan_num < min_chan:
          min_chan = chan_num
  
      if chan_num > max_chan:
          max_chan = chan_num
  
  ordered_chans = []
  for chan in xrange(min_chan, max_chan+1):
      i = 0
      while True:
          chan_num = int(channel_direcs[i].split("_")[-1])
          if chan_num == chan:
              ordered_chans.append(channel_direcs[i])
              break
          i += 1
      else:
          print("No log found for channel "+str(chan))
  
  channel_direcs = ordered_chans
  
  # Now grab the logs
  log_files = []
  for channel in channel_direcs:
      log_file = glob.glob(os.path.join(channel, "casa*.log"))
      if not log_file:
          print("Cannot find log file in "+channel)
          continue
  
      # I'm going to assume that there should only be one logfile.
      # This should be guaranteed when using my automated setup.
      log_files.append(log_file[0])
  
  # Now feed it into the results extractor
  collect_clean_results(log_files, filename=output_filename,
                        show_in_browser=show_in_browser)
  
new_contents: 
  '''
  Extracts info from the CLEAN logs in separate channels.
  '''
  
  import sys
  import glob
  import os
  import numpy as np
  
  # from casa_tools import collect_clean_results
  execfile("/home/eric/Dropbox/code_development/VLA_Lband/CASA_tools/casa_tools/extract_from_log.py")
  
  
  path_to_results = sys.argv[1]
  output_filename = sys.argv[2] if sys.argv[2] != "None" else None
  log_prefix = sys.argv[3]  # The common log file starting string
  show_in_browser = True if sys.argv[4] == "True" else False
  
  # In this case, each results is within it's own directory
  # ie. path_to_results/channel_$i/
  channel_direcs = glob.glob(os.path.join(path_to_results, "channel_*"))
  
  # Sort by the channel number
  min_chan = 10000
  max_chan = 0
  
  for channel in channel_direcs:
      # Last 3 characters
      chan_num = int(channel.split("_")[-1])
      if chan_num < min_chan:
          min_chan = chan_num
  
      if chan_num > max_chan:
          max_chan = chan_num
  
  ordered_chans = []
  for chan in xrange(min_chan, max_chan+1):
      i = 0
      while True:
          chan_num = int(channel_direcs[i].split("_")[-1])
          if chan_num == chan:
              ordered_chans.append(channel_direcs[i])
              break
          i += 1
      else:
          print("No log found for channel "+str(chan))
  
  channel_direcs = ordered_chans
  
  # Now grab the logs
  log_files = []
  for channel in channel_direcs:
      log_file = glob.glob(os.path.join(channel, "{}*.log".format(log_prefix)))
      if not log_file:
          print("Cannot find log file in "+channel)
          continue
  
      # I'm going to assume that there should only be one logfile.
      # This should be guaranteed when using my automated setup.
      log_files.append(log_file[0])
  
  # Now feed it into the results extractor
  collect_clean_results(log_files, filename=output_filename,
                        show_in_browser=show_in_browser)
  
subject: Allow a log file prefix to be passed