old_contents: # -*- coding: utf-8 -*-
  
  from os.path import abspath, dirname
  from sys import path
  
  # To temporarily modify sys.path
  SETUP_DIR = abspath(dirname(__file__))
  
  try:
      from setuptools import setup, find_packages
  except ImportError:
      path.insert(0, SETUP_DIR)
      import ez_setup
      path.pop(0)
      ez_setup.use_setuptools()
      from setuptools import setup, find_packages
  
  
  setup(
      name='cobradb',
      version='0.2.0',
      description="""COBRAdb loads genome-scale metabolic models and genome
                     annotations into a relational database.""",
      url='https://github.com/SBRG/cobradb',
      author='Zachary King',
      author_email='zaking@ucsd.edu',
      license='MIT',
      classifiers=[
          'License :: OSI Approved :: MIT License',
          'Programming Language :: Python :: 2',
          'Programming Language :: Python :: 2.7',
          'Programming Language :: Python :: 3',
          'Programming Language :: Python :: 3.5',
      ],
      keywords='systems biology, genome-scale model',
      packages=find_packages(),
      install_requires=['SQLAlchemy>=1.0.12',
                        'cobra==0.13.0',
                        'python-libsbml==5.17.0',
                        'numpy>=1.9.1',
                        'psycopg2>=2.5.4',
                        'biopython>=1.65',
                        'scipy>=0.17.0',
                        'lxml>=3.6.0',
                        'pytest>=2.6.4',
                        'six>=1.10.0',
                        'tornado>=4.4.2',
                        'escher>=1.5.0,<2',
                        'configparser>=3.5.0'],
  )
  
new_contents: # -*- coding: utf-8 -*-
  
  from os.path import abspath, dirname
  from sys import path
  
  # To temporarily modify sys.path
  SETUP_DIR = abspath(dirname(__file__))
  
  from setuptools import setup, find_packages
  
  
  setup(
      name='cobradb',
      version='0.3.0',
      description="""COBRAdb loads genome-scale metabolic models and genome
                     annotations into a relational database.""",
      url='https://github.com/SBRG/cobradb',
      author='Zachary King',
      author_email='zaking@ucsd.edu',
      license='MIT',
      classifiers=[
          'License :: OSI Approved :: MIT License',
          'Programming Language :: Python :: 3',
          'Programming Language :: Python :: 3.7',
      ],
      keywords='systems biology, genome-scale model',
      packages=find_packages(),
      install_requires=[
          'SQLAlchemy>=1.3.10,<2',
          'cobra>=0.16.0,<0.17',
          'python-libsbml>=5.18.0,<6',
          'numpy>=1.17.2,<2',
          'psycopg2>=2.8.3,<3',
          'biopython>=1.74,<2',
          'scipy>=1.3.1,<2',
          'lxml>=4.4.1,<5',
          'pytest>=4.6.6,<5',
          'six>=1.12.0,<2',
          'tornado>=4.5.3,<5',
          'escher>=1.7.3,<2',
          'configparser>=4.0.2,<5',
      ],
  )
  
subject: simplify setup.py