old_contents: """
  AGFusion is a python package to annotate and visualize gene fusions.
  """
  
  import re
  
  from setuptools import find_packages, setup
  
  VERSIONFILE = "agfusion/version.py"
  version = open(VERSIONFILE, "rt", encoding="utf8").read()
  VSRE = r"^__version__ = ['\"]([^'\"]*)['\"]"
  mo = re.search(VSRE, version, re.M)
  if mo:
      version = mo.group(1)
  else:
      raise RuntimeError(f"Unable to find version string in {VERSIONFILE}.")
  
  README = open("README.md", encoding="utf8").read()
  
  setup(
      version=version,
      name="agfusion",
      packages=find_packages(),
      description="Python package to annotate and visualize gene fusions.",
      author="Charles Murphy",
      author_email="murphy.charlesj@gmail.com",
      license="MIT",
      url="https://github.com/murphycj/AGFusion",
      long_description=README,
      long_description_content_type="text/markdown",
      include_package_data=True,
      scripts=["bin/agfusion"],
      install_requires=[
          "matplotlib>=1.5.0",
          "pandas>=0.18.1",
          "biopython>=1.67",
          "future>=0.16.0",
          "pyensembl>=1.1.0",
      ],
  )
  
new_contents: """
  AGFusion is a python package to annotate and visualize gene fusions.
  """
  
  import re
  
  from setuptools import find_packages, setup
  
  VERSIONFILE = "agfusion/version.py"
  version = open(VERSIONFILE, "rt", encoding="utf8").read()
  VSRE = r"^__version__ = ['\"]([^'\"]*)['\"]"
  mo = re.search(VSRE, version, re.M)
  if mo:
      version = mo.group(1)
  else:
      raise RuntimeError(f"Unable to find version string in {VERSIONFILE}.")
  
  README = open("README.md", encoding="utf8").read()
  
  setup(
      # version=version,
      version="1.252",
      name="agfusion",
      packages=find_packages(),
      description="Python package to annotate and visualize gene fusions.",
      author="Charles Murphy",
      author_email="murphy.charlesj@gmail.com",
      license="MIT",
      url="https://github.com/murphycj/AGFusion",
      long_description=README,
      long_description_content_type="text/markdown",
      include_package_data=True,
      scripts=["bin/agfusion"],
      install_requires=[
          "matplotlib>=1.5.0",
          "pandas>=0.18.1",
          "biopython>=1.67",
          "future>=0.16.0",
          "pyensembl>=1.1.0",
      ],
  )
  
subject: update setup