new_contents: ##############################################################################
  # Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
  # Produced at the Lawrence Livermore National Laboratory.
  #
  # This file is part of Spack.
  # Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
  # LLNL-CODE-647188
  #
  # For details, see https://github.com/spack/spack
  # Please also see the NOTICE and LICENSE files for our notice and the LGPL.
  #
  # This program is free software; you can redistribute it and/or modify
  # it under the terms of the GNU Lesser General Public License (as
  # published by the Free Software Foundation) version 2.1, February 1999.
  #
  # This program is distributed in the hope that it will be useful, but
  # WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
  # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
  # conditions of the GNU Lesser General Public License for more details.
  #
  # You should have received a copy of the GNU Lesser General Public
  # License along with this program; if not, write to the Free Software
  # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
  ##############################################################################
  from spack import *
  
  
  class PyCheckmGenome(PythonPackage):
      """Assess the quality of microbial genomes recovered from isolates, single
      cells, and metagenomes"""
  
      homepage = "https://ecogenomics.github.io/CheckM"
      url      = "https://pypi.io/packages/source/c/checkm-genome/checkm-genome-1.0.11.tar.gz"
  
      version('1.0.11', '3058546ec324e2420cf72f0d2576114b')
  
      depends_on('hmmer@3.1b1:')
      depends_on('prodigal@2.6.1:')
      depends_on('py-numpy@1.8.0:',        type=('build', 'run'))
      depends_on('py-scipy@0.9.0:',        type=('build', 'run'))
      depends_on('py-matplotlib@1.3.1:',   type=('build', 'run'))
      depends_on('py-pysam@0.8.3:',        type=('build', 'run'))
      depends_on('py-dendropy@4.0.0:',     type=('build', 'run'))
  
subject: Create new package (#7200)