old_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  
  from setuptools import setup, find_packages
  
  #load version number (can't just import the package since we might miss requirements)
  filename = 'dnacol/version.py'
  exec(compile(open(filename, "rb").read(), filename, 'exec')) #python2/3 compatible replacement for execfile()
  
  #load long description from readme
  with open('README.rst') as f:
      long_description = f.read()
  
  setup(
      name = __title__,
      version = __version__,
      packages = find_packages(),
  
      # metadata for upload to PyPI
      author = "Nils Koelling",
      author_email = "git@nk.gl",
      description = "Display FASTA/FASTQ/SAM/VCF files with colored DNA/RNA bases and quality scores (`dnacol`) or colored amino acid codes (`pcol`) in the terminal",
      long_description = long_description,
      license = "MIT",
      keywords = "dnacol rnacol pcol rna dna protein amino acid quality phred color colour bases console terminal stdout",
      url = "https://github.com/koelling/dnacol/",
      download_url="https://github.com/koelling/dnacol/archive/v%s.tar.gz" % __version__,
      platforms=["any"],
  
      entry_points={
          'console_scripts': [
              'dnacol = dnacol.dnacol:main_dna',
              'pcol = dnacol.dnacol:main_protein'
          ]
      },
  
      classifiers=[
          'Development Status :: 4 - Beta',
          'License :: OSI Approved :: MIT License',
          'Operating System :: MacOS',
          'Operating System :: Unix',
          'Programming Language :: Python :: 2',
          'Programming Language :: Python :: 3',
      ]
  )
  
new_contents: #!/usr/bin/env python
  # -*- coding: utf-8 -*-
  
  from setuptools import setup, find_packages
  
  #load version number (can't just import the package since we might miss requirements)
  filename = 'dnacol/version.py'
  exec(compile(open(filename, "rb").read(), filename, 'exec')) #python2/3 compatible replacement for execfile()
  
  #load long description from readme
  with open('README.rst') as f:
      long_description = f.read()
  
  setup(
      name = __title__,
      version = __version__,
      packages = find_packages(),
  
      # metadata for upload to PyPI
      author = "Nils Koelling",
      author_email = "git@nk.gl",
      description = "Display FASTA/FASTQ/SAM/VCF files with colored DNA/RNA bases and quality scores (`dnacol`) or a protein sequence with colored amino acid codes (`pcol`) in the terminal",
      long_description = long_description,
      license = "MIT",
      keywords = "dnacol rnacol pcol rna dna protein amino acid quality phred color colour bases console terminal stdout",
      url = "https://github.com/koelling/dnacol/",
      download_url="https://github.com/koelling/dnacol/archive/v%s.tar.gz" % __version__,
      platforms=["any"],
  
      entry_points={
          'console_scripts': [
              'dnacol = dnacol.dnacol:main_dna',
              'pcol = dnacol.dnacol:main_protein'
          ]
      },
  
      classifiers=[
          'Development Status :: 4 - Beta',
          'License :: OSI Approved :: MIT License',
          'Operating System :: MacOS',
          'Operating System :: Unix',
          'Programming Language :: Python :: 2.7',
          'Programming Language :: Python :: 3',
      ],
  
      install_requires=[
          'pyyaml',
      ],
  )
  
subject: update setup.py description, reqs, python version