old_contents: import os
  import sys
  
  try:
      from setuptools import setup
  except ImportError:
      from distutils.core import setup
  
  # https://packaging.python.org/single_source_version/
  execfile("genomepy/__about__.py")
  
  if sys.argv[-1] == 'publish':
      os.system('python setup.py sdist upload')
      sys.exit()
  
  # trick to get rst file for PyPi, see:
  # http://stackoverflow.com/questions/26737222/pypi-description-markdown-doesnt-work/26737672#26737672
  # For the recent versions of pandoc, pypandoc >=1.3.3 is needed.
  try:
      import pypandoc
      long_description = pypandoc.convert('README.md', 'rst')
  except(IOError, ImportError, RuntimeError):
      long_description = open('README.md').read()
  
  packages = [
      'genomepy',
  ]
  
  package_data = {
      'genomepy': ['cfg/*.yaml'],
  }
  
  requires = [
      'nose',
      'click',
      'pyfaidx',
      'norns>0.0.1',
      'xmltodict',
  ]
  
  scripts = [
      'bin/genomepy'
  ]
  
  classifiers = [
          'Development Status :: 4 - Beta',
          'Intended Audience :: Developers',
          'Intended Audience :: Science/Research',
          'License :: OSI Approved :: MIT License',
          'Operating System :: MacOS :: MacOS X',
          'Operating System :: MacOS :: MacOS X',
          'Operating System :: POSIX :: Linux',
          'Programming Language :: Python',
          'Programming Language :: Python :: 2.7',
          'Programming Language :: Python :: 3.3',
          'Programming Language :: Python :: 3.4',
          'Programming Language :: Python :: 3.5',
          'Programming Language :: Python :: 3.6',
          'Topic :: Scientific/Engineering :: Bio-Informatics',
  ]
  
  setup(
      name='genomepy',
      version=__version__,
      description='Genomes in Python',
      long_description=long_description,
      packages=packages,
      package_data=package_data,
      scripts=scripts,
      install_requires=requires,
      author=__author__,
      author_email='simon.vanheeringen@gmail.com',
      url='https://github.com/simonvh/genomepy',
      license='MIT',
      classifiers=classifiers,
  )
  
new_contents: import os
  import sys
  
  try:
      from setuptools import setup
  except ImportError:
      from distutils.core import setup
  
  # https://packaging.python.org/single_source_version/
  exec(open("genomepy/__about__.py").read())
  
  if sys.argv[-1] == 'publish':
      os.system('python setup.py sdist upload')
      sys.exit()
  
  # trick to get rst file for PyPi, see:
  # http://stackoverflow.com/questions/26737222/pypi-description-markdown-doesnt-work/26737672#26737672
  # For the recent versions of pandoc, pypandoc >=1.3.3 is needed.
  try:
      import pypandoc
      long_description = pypandoc.convert('README.md', 'rst')
  except(IOError, ImportError, RuntimeError):
      long_description = open('README.md').read()
  
  packages = [
      'genomepy',
  ]
  
  package_data = {
      'genomepy': ['cfg/*.yaml'],
  }
  
  requires = [
      'nose',
      'click',
      'pyfaidx',
      'norns>0.0.1',
      'xmltodict',
  ]
  
  scripts = [
      'bin/genomepy'
  ]
  
  classifiers = [
          'Development Status :: 4 - Beta',
          'Intended Audience :: Developers',
          'Intended Audience :: Science/Research',
          'License :: OSI Approved :: MIT License',
          'Operating System :: MacOS :: MacOS X',
          'Operating System :: MacOS :: MacOS X',
          'Operating System :: POSIX :: Linux',
          'Programming Language :: Python',
          'Programming Language :: Python :: 2.7',
          'Programming Language :: Python :: 3.3',
          'Programming Language :: Python :: 3.4',
          'Programming Language :: Python :: 3.5',
          'Programming Language :: Python :: 3.6',
          'Topic :: Scientific/Engineering :: Bio-Informatics',
  ]
  
  setup(
      name='genomepy',
      version=__version__,
      description='Genomes in Python',
      long_description=long_description,
      packages=packages,
      package_data=package_data,
      scripts=scripts,
      install_requires=requires,
      author=__author__,
      author_email='simon.vanheeringen@gmail.com',
      url='https://github.com/simonvh/genomepy',
      license='MIT',
      classifiers=classifiers,
  )
  
subject: fix for Python 3