old_contents: import os
  
  try:
      from setuptools import setup
  except ImportError:
      sys.exit('ERROR: setuptools is required.\n')
  
  try:
      from pip.req import parse_requirements
  except ImportError:
      sys.exit('ERROR: pip is required.\n')
  
  
  if os.environ.get('READTHEDOCS', None):
      # Set empty install_requires to get install to work on readthedocs
      install_requires = []
  else:
      req_file = 'requirements.txt'
      try:
          reqs = parse_requirements(req_file, session=False)
      except TypeError:
          reqs = parse_requirements(req_file)
      install_requires = [str(r.req) for r in reqs]
  
  
  config = {
      'description': 'VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.',
      'author': 'Bryan Briney',
      'url': 'https://www.github.com/briney/abstar',
      # 'download_url': 'www.github.com/briney/abstar/',
      'author_email': 'briney@scripps.edu',
      'version': '0.2.8',
      'install_requires': install_requires,
      'packages': ['abstar'],
      'scripts': ['bin/abstar',
                  'bin/batch_mongoimport',
                  'bin/build_abstar_germline_db',
                  'bin/make_basespace_credfile'],
      'name': 'abstar',
      'include_package_data': True
  }
  
  setup(**config)
  
new_contents: import os
  
  try:
      from setuptools import setup
  except ImportError:
      sys.exit('ERROR: setuptools is required.\n')
  
  try:
      from pip.req import parse_requirements
  except ImportError:
      sys.exit('ERROR: pip is required.\n')
  
  
  if os.environ.get('READTHEDOCS', None):
      # Set empty install_requires to get install to work on readthedocs
      install_requires = []
  else:
      req_file = 'requirements.txt'
      try:
          reqs = parse_requirements(req_file, session=False)
      except TypeError:
          reqs = parse_requirements(req_file)
      install_requires = [str(r.req) for r in reqs]
  
  
  config = {
      'description': 'VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.',
      'author': 'Bryan Briney',
      'url': 'https://www.github.com/briney/abstar',
      # 'download_url': 'www.github.com/briney/abstar/',
      'author_email': 'briney@scripps.edu',
      'version': '0.2.9',
      'install_requires': install_requires,
      'packages': ['abstar'],
      'scripts': ['bin/abstar',
                  'bin/batch_mongoimport',
                  'bin/build_abstar_germline_db',
                  'bin/make_basespace_credfile'],
      'name': 'abstar',
      'include_package_data': True
  }
  
  setup(**config)
  
subject: bump PyPI version to 0.2.9