old_contents: '''
  Created on 25/03/2009
  
  @author: jose blanca
  '''
  
  from setuptools import setup
  setup(
      # basic package data
      name = "biolib",
      version = "0.0.1",
      author='Jose Blanca, Peio Ziarsolo',
      author_email='jblanca@btc.upv.es',
      description='Some genomics related classes',
      # package structure
      packages=['biolib', 'biolib.seqvar', 'biolib.db'],
      package_dir={'':'.'},
      package_data={'mypkg': ['data/*']},
      requires=['BioPython', 'sqlalchemy', 'matplotlib'],
      scripts=['scripts/run_cleanning_pipeline.py', 'scripts/seqvar/run_bwa.py']
  )
  
new_contents: '''
  Created on 25/03/2009
  
  @author: jose blanca
  '''
  
  from setuptools import setup
  setup(
      # basic package data
      name = "biolib",
      version = "0.0.1",
      author='Jose Blanca, Peio Ziarsolo',
      author_email='jblanca@btc.upv.es',
      description='Some genomics related classes',
      # package structure
      packages=['biolib', 'biolib.snv', 'biolib.db', 'biolib.gmod', 'biolib.seq',
                'biolib.utils'],
      package_dir={'':'.'},
      package_data={'mypkg': ['data/*']},
      requires=['BioPython', 'sqlalchemy', 'matplotlib'],
      scripts=['scripts/run_cleanning_pipeline.py', 'scripts/snv/run_bwa.py',
               'scripts/seqio.py', ]
  )
  
subject: update setup.py to the refactoring