old_contents: # Copyright (C) 2015 UCSC Computational Genomics Lab
  #
  # Licensed under the Apache License, Version 2.0 (the "License");
  # you may not use this file except in compliance with the License.
  # You may obtain a copy of the License at
  #
  #     http://www.apache.org/licenses/LICENSE-2.0
  #
  # Unless required by applicable law or agreed to in writing, software
  # distributed under the License is distributed on an "AS IS" BASIS,
  # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  # See the License for the specific language governing permissions and
  # limitations under the License.
  
  version = '1.3.1a1'
  
  required_versions = {'pyyaml': '>=3.11',
                       'boto3': '>=1.4.5',
                       'tsv': '==1.2',
                       'scikit-learn': '==0.18.2',
                       'pyvcf': '==0.6.8'}
  
  dependency_links = []
  
new_contents: # Copyright (C) 2015 UCSC Computational Genomics Lab
  #
  # Licensed under the Apache License, Version 2.0 (the "License");
  # you may not use this file except in compliance with the License.
  # You may obtain a copy of the License at
  #
  #     http://www.apache.org/licenses/LICENSE-2.0
  #
  # Unless required by applicable law or agreed to in writing, software
  # distributed under the License is distributed on an "AS IS" BASIS,
  # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  # See the License for the specific language governing permissions and
  # limitations under the License.
  
  version = '1.4.1a1'
  
  required_versions = {'pyyaml': '>=3.11',
                       'boto3': '>=1.4.5',
                       'tsv': '==1.2',
                       'scikit-learn': '==0.18.2',
                       'pyvcf': '==0.6.8'}
  
  dependency_links = []
  
subject: increase version