old_contents: from setuptools import setup, find_packages
  import re
  
  def get_package_version(path):
      '''Extracts the version'''
      with open(VERSION_FILE, "rt") as f:
          verstrline = f.read()
  
      VERSION = r"^version = ['\"]([^'\"]*)['\"]"
      results = re.search(VERSION, verstrline, re.M)
  
      if results:
          version = results.group(1)
      else:
          raise RuntimeError("Unable to find version string in {}.".format(path))
  
      return version
  
  VERSION_FILE = "fcsparser/_version.py"
  
  version = get_package_version(VERSION_FILE)
  
  with open('README.rst', 'r') as f:
      README_content = f.read()
  
  setup(
      name='fcsparser',
      packages=find_packages(),
      version=version,
      description='A python package for reading raw fcs files',
      author='Eugene Yurtsev',
      author_email='eyurtsev@gmail.com',
      url='https://github.com/eyurtsev/fcsparser',
      download_url='https://github.com/eyurtsev/fcsparser/archive/v{0}.zip'.format(version),
      keywords=['flow cytometry', 'data analysis', 'cytometry', 'parser', 'data'],
      license='MIT',
  
      install_requires=[
          "setuptools",
      ],
  
      classifiers=[
          'Intended Audience :: Science/Research',
          'Programming Language :: Python :: 2',
          'Topic :: Scientific/Engineering :: Bio-Informatics',
          'Topic :: Scientific/Engineering :: Medical Science Apps.',
      ],
  
      long_description=README_content,
  )
  
new_contents: import re
  import fnmatch
  import os
  
  from setuptools import setup, find_packages
  
  def get_package_version(path):
      '''Extracts the version'''
      with open(VERSION_FILE, "rt") as f:
          verstrline = f.read()
  
      VERSION = r"^version = ['\"]([^'\"]*)['\"]"
      results = re.search(VERSION, verstrline, re.M)
  
      if results:
          version = results.group(1)
      else:
          raise RuntimeError("Unable to find version string in {}.".format(path))
  
      return version
  
  def get_fcs_files():
      matches = []
      for root, dirnames, filenames in os.walk('fcsparser'):
        for filename in fnmatch.filter(filenames, '*.fcs'):
          matches.append(os.path.join(root, filename))
      return matches
  
  VERSION_FILE = "fcsparser/_version.py"
  
  version = get_package_version(VERSION_FILE)
  
  with open('README.rst', 'r') as f:
      README_content = f.read()
  
  setup(
      name='fcsparser',
      packages=find_packages(),
      version=version,
      description='A python package for reading raw fcs files',
      author='Eugene Yurtsev',
      author_email='eyurtsev@gmail.com',
      url='https://github.com/eyurtsev/fcsparser',
      download_url='https://github.com/eyurtsev/fcsparser/archive/v{0}.zip'.format(version),
      keywords=['flow cytometry', 'data analysis', 'cytometry', 'parser', 'data'],
      license='MIT',
  
      install_requires=[
          "setuptools",
      ],
  
      classifiers=[
          'Intended Audience :: Science/Research',
          'Programming Language :: Python :: 2',
          'Topic :: Scientific/Engineering :: Bio-Informatics',
          'Topic :: Scientific/Engineering :: Medical Science Apps.',
      ],
  
      long_description=README_content,
      include_package_data = True,
  
      package_data={
          'fcsparser': get_fcs_files(),
      },
  )
  
subject: fix to include fcs data files