old_contents: #!/usr/bin/env python
  
  # -----------------------------------------------------------------------------
  # Copyright (c) 2013, The Deblur Development Team.
  #
  # Distributed under the terms of the BSD 3-clause License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # -----------------------------------------------------------------------------
  from setuptools import setup
  from glob import glob
  
  
  __version__ = "0.0.1-dev"
  
  
  classes = """
      Development Status :: 2 - Pre-Alpha
      License :: OSI Approved :: BSD License
      Topic :: Scientific/Engineering :: Bio-Informatics
      Topic :: Software Development :: Libraries :: Application Frameworks
      Topic :: Software Development :: Libraries :: Python Modules
      Programming Language :: Python
      Programming Language :: Python :: 3.5
      Programming Language :: Python :: Implementation :: CPython
      Operating System :: POSIX :: Linux
      Operating System :: MacOS :: MacOS X
  """
  
  long_description = ("Deblur: a greedy deconvolution algorithm based on known "
                      "read error profiles")
  
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  setup(name='deblur',
        version=__version__,
        long_description=long_description,
        license="BSD",
        description='Deblur',
        author="Deblur development team",
        author_email="amnonim@gmail.com",
        url='https://github.com/biocore/deblur',
        test_suite='nose.collector',
        packages=['deblur'],
        package_data={},
        scripts=glob('scripts/*'),
        extras_require={'test': ["nose >= 0.10.1", "pep8"],
                        'doc': ["Sphinx >= 1.2.2", "sphinx-bootstrap-theme"]},
        install_requires=['click >= 6', 'numpy >= 1.7',
                          'scikit-bio >= 0.5.0, < 0.6.0',
                          'biom-format >= 2.1.3, < 2.2.0',
                          'h5py >= 2.2.0'],
        classifiers=classifiers
        )
  
new_contents: #!/usr/bin/env python
  
  # -----------------------------------------------------------------------------
  # Copyright (c) 2013, The Deblur Development Team.
  #
  # Distributed under the terms of the BSD 3-clause License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # -----------------------------------------------------------------------------
  from setuptools import setup
  from glob import glob
  
  
  __version__ = "0.0.1-dev"
  
  
  classes = """
      Development Status :: 2 - Pre-Alpha
      License :: OSI Approved :: BSD License
      Topic :: Scientific/Engineering :: Bio-Informatics
      Topic :: Software Development :: Libraries :: Application Frameworks
      Topic :: Software Development :: Libraries :: Python Modules
      Programming Language :: Python
      Programming Language :: Python :: 3.5
      Programming Language :: Python :: Implementation :: CPython
      Operating System :: POSIX :: Linux
      Operating System :: MacOS :: MacOS X
  """
  
  long_description = ("Deblur: a greedy deconvolution algorithm based on known "
                      "read error profiles")
  
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  setup(name='deblur',
        version=__version__,
        long_description=long_description,
        license="BSD",
        description='Deblur',
        author="Deblur development team",
        author_email="amnonim@gmail.com",
        url='https://github.com/biocore/deblur',
        test_suite='nose.collector',
        packages=['deblur'],
        package_data={},
        data_files=[('deblur', ['deblur/support_file/artifacts.fa',
                                'deblur/support_file/88_otus.fasta'])],
        scripts=glob('scripts/*'),
        extras_require={'test': ["nose >= 0.10.1", "pep8"],
                        'doc': ["Sphinx >= 1.2.2", "sphinx-bootstrap-theme"]},
        install_requires=['click >= 6', 'numpy >= 1.7',
                          'scikit-bio >= 0.5.0, < 0.6.0',
                          'biom-format >= 2.1.3, < 2.2.0',
                          'h5py >= 2.2.0'],
        classifiers=classifiers
        )
  
subject: add data files in setup