old_contents: from setuptools import setup, find_packages
  
  with open('doc/description.txt') as f:
      long_description = f.read()
  
  
  setup(
      license = 'Apache License 2.0 (http://www.apache.org/licenses/LICENSE-2.0)',
      long_description = long_description,
      use_scm_version = True,
      zip_safe = True,
  
      author = 'HGVS Contributors',
      author_email = 'reecehart+hgvs@gmail.com',
      description = """HGVS Parser, Formatter, Mapper, Validator""",
      name = "hgvs",
      package_data = {'hgvs': ['_data/*']},
      packages = find_packages(),
      url = 'https://bitbucket.org/biocommons/hgvs',
  
      classifiers = [
          "Development Status :: 3 - Alpha",
          "Intended Audience :: Developers",
          "Intended Audience :: Healthcare Industry",
          "Intended Audience :: Science/Research",
          "License :: OSI Approved :: Apache Software License",
          "Operating System :: OS Independent",
          "Programming Language :: Python :: 2",
          "Programming Language :: Python",
          "Topic :: Database :: Front-Ends",
          "Topic :: Scientific/Engineering :: Bio-Informatics",
          "Topic :: Scientific/Engineering :: Medical Science Apps.",
      ],
  
      keywords = [
          'bioinformatics',
          'computational biology',
          'genome variants',
          'genome variation',
          'genomic variants',
          'genomic variation',
          'genomics',
          'hgvs',
      ],
  
      install_requires = [
          'psycopg2',
          'biopython',
          'bioutils>=0.0.4',
          'multifastadb',
          'parsley',
          'recordtype',
      ],
  
      setup_requires = [
          'biocommons.dev',
          'setuptools_scm',
          'nose',
          'sphinx',
          'sphinxcontrib-fulltoc',
          'wheel',
      ],
  
      tests_require = [
          'coverage',
          'unicodecsv',
      ],
  )
  
  ## <LICENSE>
  ## Copyright 2014 HGVS Contributors (https://bitbucket.org/biocommons/hgvs)
  ## 
  ## Licensed under the Apache License, Version 2.0 (the "License");
  ## you may not use this file except in compliance with the License.
  ## You may obtain a copy of the License at
  ## 
  ##     http://www.apache.org/licenses/LICENSE-2.0
  ## 
  ## Unless required by applicable law or agreed to in writing, software
  ## distributed under the License is distributed on an "AS IS" BASIS,
  ## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ## See the License for the specific language governing permissions and
  ## limitations under the License.
  ## </LICENSE>
  
new_contents: from setuptools import setup, find_packages
  
  with open('doc/description.txt') as f:
      long_description = f.read()
  
  
  setup(
      license = 'Apache License 2.0 (http://www.apache.org/licenses/LICENSE-2.0)',
      long_description = long_description,
      use_scm_version = True,
      zip_safe = True,
  
      author = 'HGVS Contributors',
      author_email = 'reecehart+hgvs@gmail.com',
      description = """HGVS Parser, Formatter, Mapper, Validator""",
      name = "hgvs",
      package_data = {'hgvs': ['_data/*']},
      packages = find_packages(),
      url = 'https://bitbucket.org/biocommons/hgvs',
  
      classifiers = [
          "Development Status :: 3 - Alpha",
          "Intended Audience :: Developers",
          "Intended Audience :: Healthcare Industry",
          "Intended Audience :: Science/Research",
          "License :: OSI Approved :: Apache Software License",
          "Operating System :: OS Independent",
          "Programming Language :: Python :: 2",
          "Programming Language :: Python",
          "Topic :: Database :: Front-Ends",
          "Topic :: Scientific/Engineering :: Bio-Informatics",
          "Topic :: Scientific/Engineering :: Medical Science Apps.",
      ],
  
      keywords = [
          'bioinformatics',
          'computational biology',
          'genome variants',
          'genome variation',
          'genomic variants',
          'genomic variation',
          'genomics',
          'hgvs',
      ],
  
      install_requires = [
          'psycopg2',
          'biopython',
          'bioutils>=0.0.6',
          'multifastadb',
          'parsley',
          'recordtype',
      ],
  
      setup_requires = [
          'biocommons.dev',
          'setuptools_scm',
          'nose',
          'sphinx',
          'sphinxcontrib-fulltoc',
          'wheel',
      ],
  
      tests_require = [
          'coverage',
          'unicodecsv',
      ],
  )
  
  ## <LICENSE>
  ## Copyright 2014 HGVS Contributors (https://bitbucket.org/biocommons/hgvs)
  ## 
  ## Licensed under the Apache License, Version 2.0 (the "License");
  ## you may not use this file except in compliance with the License.
  ## You may obtain a copy of the License at
  ## 
  ##     http://www.apache.org/licenses/LICENSE-2.0
  ## 
  ## Unless required by applicable law or agreed to in writing, software
  ## distributed under the License is distributed on an "AS IS" BASIS,
  ## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  ## See the License for the specific language governing permissions and
  ## limitations under the License.
  ## </LICENSE>
  
subject: update bioutils version in setup.py