old_contents: #!/usr/bin/env python
  
  #-----------------------------------------------------------------------------
  # Copyright (c) 2013, The BiPy Developers.
  #
  # Distributed under the terms of the Modified BSD License.
  #
  # The full license is in the file COPYING.txt, distributed with this software.
  #-----------------------------------------------------------------------------
  
  __version__ = '0.0.0-dev'
  
  from setuptools import setup
  from distutils.command.build_py import build_py
  
  classes = """
      Development Status :: 1 - Planning
      License :: OSI Approved :: BSD License
      Topic :: Software Development :: Libraries
      Programming Language :: Python
      Programming Language :: Python :: 2.7
      Operating System :: Unix
      Operating System :: POSIX
      Operating System :: MacOS :: MacOS X
  """
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  long_description = """The BiPy Project"""
  
  setup(name='bipy',
        cmdclass={'build_py': build_py},
        version=__version__,
        license='BSD',
        description='bipy',
        long_description=long_description,
        author="The BiPy Developers",
        author_email="gregcaporaso@gmail.com",
        maintainer="The BiPy Developers",
        maintainer_email="gregcaporaso@gmail.com",
        url='https://github.com/biocore/bipy',
        packages=['bipy'],
        install_requires=['numpy >= 1.5.1, <=1.7.1', 'matplotlib >= 1.1.0',
                          'scipy >=0.13.0'],
        extras_require={'test': ["nose >= 0.10.1", "tox >= 1.6.1", "pep8"],
                        'doc': "Sphinx >= 0.3"},
        classifiers=classifiers
        )
  
new_contents: #!/usr/bin/env python
  
  #-----------------------------------------------------------------------------
  # Copyright (c) 2013, The BiPy Developers.
  #
  # Distributed under the terms of the Modified BSD License.
  #
  # The full license is in the file COPYING.txt, distributed with this software.
  #-----------------------------------------------------------------------------
  
  __version__ = '0.0.0-dev'
  
  from setuptools import find_packages, setup
  from distutils.command.build_py import build_py
  
  classes = """
      Development Status :: 1 - Planning
      License :: OSI Approved :: BSD License
      Topic :: Software Development :: Libraries
      Programming Language :: Python
      Programming Language :: Python :: 2.7
      Operating System :: Unix
      Operating System :: POSIX
      Operating System :: MacOS :: MacOS X
  """
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  long_description = """The BiPy Project"""
  
  setup(name='bipy',
        cmdclass={'build_py': build_py},
        version=__version__,
        license='BSD',
        description='bipy',
        long_description=long_description,
        author="The BiPy Developers",
        author_email="gregcaporaso@gmail.com",
        maintainer="The BiPy Developers",
        maintainer_email="gregcaporaso@gmail.com",
        url='https://github.com/biocore/bipy',
        packages=find_packages(),
        install_requires=['numpy >= 1.5.1, <=1.7.1', 'matplotlib >= 1.1.0',
                          'scipy >=0.13.0'],
        extras_require={'test': ["nose >= 0.10.1", "tox >= 1.6.1", "pep8"],
                        'doc': "Sphinx >= 0.3"},
        classifiers=classifiers
        )
  
subject: Fix setup.py to include subpackages