old_contents: #!/usr/bin/env python
  
  # -----------------------------------------------------------------------------
  # Copyright (c) 2013, The Deblur Development Team.
  #
  # Distributed under the terms of the BSD 3-clause License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # -----------------------------------------------------------------------------
  from setuptools import setup
  from glob import glob
  import re
  import ast
  
  # version parsing from __init__ pulled from Flask's setup.py
  # https://github.com/mitsuhiko/flask/blob/master/setup.py
  _version_re = re.compile(r'__version__\s+=\s+(.*)')
  
  with open('deblur/__init__.py', 'rb') as f:
      hit = _version_re.search(f.read().decode('utf-8')).group(1)
      __version__ = str(ast.literal_eval(hit))
  
  
  classes = """
      Development Status :: 4 - Beta
      License :: OSI Approved :: BSD License
      Topic :: Scientific/Engineering :: Bio-Informatics
      Topic :: Software Development :: Libraries :: Application Frameworks
      Topic :: Software Development :: Libraries :: Python Modules
      Programming Language :: Python
      Programming Language :: Python :: 3.8
      Programming Language :: Python :: Implementation :: CPython
      Operating System :: POSIX :: Linux
      Operating System :: MacOS :: MacOS X
  """
  
  long_description = ("Deblur: a greedy deconvolution algorithm based on known "
                      "read error profiles")
  
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  setup(name='deblur',
        version=__version__,
        long_description=long_description,
        license="BSD",
        description='Deblur',
        author="Deblur development team",
        author_email="amnonim@gmail.com",
        url='https://github.com/biocore/deblur',
        test_suite='nose.collector',
        packages=['deblur', 'deblur.support_files', 'deblur.test'],
        package_data={'deblur.support_files': ['artifacts.fa', '88_otus.fasta']},
        scripts=glob('scripts/*'),
        extras_require={'test': ["nose >= 0.10.1", "pep8"],
                        'doc': ["Sphinx >= 1.2.2", "sphinx-bootstrap-theme"]},
        install_requires=['click', 'numpy >= 1.7',
                          'scikit-bio >= 0.5.0, < 0.6.0',
                          'biom-format >= 2.1.3, < 2.2.0',
                          'h5py >= 2.2.0', 'scipy >= 0.15.1'],
        classifiers=classifiers
        )
  
new_contents: #!/usr/bin/env python
  
  # -----------------------------------------------------------------------------
  # Copyright (c) 2013, The Deblur Development Team.
  #
  # Distributed under the terms of the BSD 3-clause License.
  #
  # The full license is in the file LICENSE, distributed with this software.
  # -----------------------------------------------------------------------------
  from setuptools import setup
  from glob import glob
  import re
  import ast
  
  # version parsing from __init__ pulled from Flask's setup.py
  # https://github.com/mitsuhiko/flask/blob/master/setup.py
  _version_re = re.compile(r'__version__\s+=\s+(.*)')
  
  with open('deblur/__init__.py', 'rb') as f:
      hit = _version_re.search(f.read().decode('utf-8')).group(1)
      __version__ = str(ast.literal_eval(hit))
  
  
  classes = """
      Development Status :: 4 - Beta
      License :: OSI Approved :: BSD License
      Topic :: Scientific/Engineering :: Bio-Informatics
      Topic :: Software Development :: Libraries :: Application Frameworks
      Topic :: Software Development :: Libraries :: Python Modules
      Programming Language :: Python
      Programming Language :: Python :: 3.8
      Programming Language :: Python :: Implementation :: CPython
      Operating System :: POSIX :: Linux
      Operating System :: MacOS :: MacOS X
  """
  
  long_description = ("Deblur: a greedy deconvolution algorithm based on known "
                      "read error profiles")
  
  classifiers = [s.strip() for s in classes.split('\n') if s]
  
  setup(name='deblur',
        version=__version__,
        long_description=long_description,
        license="BSD",
        description='Deblur',
        author="Deblur development team",
        author_email="amnonim@gmail.com",
        url='https://github.com/biocore/deblur',
        test_suite='nose.collector',
        packages=['deblur', 'deblur.support_files', 'deblur.test'],
        package_data={
          'deblur.support_files': ['artifacts.fa', '88_otus.fasta'],
          'deblur.test.data': ['*'],
        },
        scripts=glob('scripts/*'),
        extras_require={'test': ["nose >= 0.10.1", "pep8"],
                        'doc': ["Sphinx >= 1.2.2", "sphinx-bootstrap-theme"]},
        install_requires=['click', 'numpy >= 1.7',
                          'scikit-bio >= 0.5.0, < 0.6.0',
                          'biom-format >= 2.1.3, < 2.2.0',
                          'h5py >= 2.2.0', 'scipy >= 0.15.1'],
        classifiers=classifiers
        )
  
subject: add test data to setup.py