old_contents: #!/usr/bin/env python
  import glob
  from setuptools import setup, find_packages
  from os.path import join, abspath, dirname
  
  requirements_txt = join(abspath(dirname(__file__)), 'requirements.txt')
  requirements = [l.strip() for l in open(requirements_txt) if l and not l.startswith('#')]
  
  version = '0.1.1'
  
  
  setup(
      name='clarity_scripts',
      version=version,
      packages=find_packages(exclude=('tests',)),
      url='https://github.com/EdinburghGenomics/clarity_scripts',
      license='MIT',
      description='Clarity EPPs used in Edinburgh Genomics',
      long_description='Set of scripts used at Edinburgh Genomics to automate steps of in Clarity LIMS',
      install_requires=requirements,  # actual module requirements
      scripts=glob.glob("scripts/*.py"),
      zip_safe=False,
      author='Timothee Cezard',
      author_email='timothee.cezard@ed.ac.uk'
  
  )
new_contents: #!/usr/bin/env python
  import glob
  from setuptools import setup, find_packages
  from os.path import join, abspath, dirname
  
  requirements_txt = join(abspath(dirname(__file__)), 'requirements.txt')
  requirements = [l.strip() for l in open(requirements_txt) if l and not l.startswith('#')]
  
  version = '0.1.1'
  
  
  setup(
      name='clarity_scripts',
      version=version,
      packages=find_packages(exclude=('tests',)),
      url='https://github.com/EdinburghGenomics/clarity_scripts',
      license='MIT',
      description='Clarity EPPs used in Edinburgh Genomics',
      long_description='Set of scripts used at Edinburgh Genomics to automate steps of in Clarity LIMS',
      install_requires=requirements,  # actual module requirements
      scripts=glob.glob("scripts/*.py") + glob.glob("prodscripts/*.py"),
      zip_safe=False,
      author='Timothee Cezard',
      author_email='timothee.cezard@ed.ac.uk'
  
  )
subject: update setup.py