old_contents: ##############################################################################
  # Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
  # Produced at the Lawrence Livermore National Laboratory.
  #
  # This file is part of Spack.
  # Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
  # LLNL-CODE-647188
  #
  # For details, see https://github.com/spack/spack
  # Please also see the NOTICE and LICENSE files for our notice and the LGPL.
  #
  # This program is free software; you can redistribute it and/or modify
  # it under the terms of the GNU Lesser General Public License (as
  # published by the Free Software Foundation) version 2.1, February 1999.
  #
  # This program is distributed in the hope that it will be useful, but
  # WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
  # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
  # conditions of the GNU Lesser General Public License for more details.
  #
  # You should have received a copy of the GNU Lesser General Public
  # License along with this program; if not, write to the Free Software
  # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
  ##############################################################################
  from spack import *
  
  
  class Salmon(CMakePackage):
      """Salmon is a tool for quantifying the expression of transcripts using
         RNA-seq data."""
  
      homepage = "http://combine-lab.github.io/salmon/"
      url      = "https://github.com/COMBINE-lab/salmon/archive/v0.8.2.tar.gz"
  
      version('0.9.1', '1277b8ed65d2c6982ed176a496a2a1e3')
      version('0.8.2', 'ee512697bc44b13661a16d4e14cf0a00')
  
      depends_on('tbb')
      depends_on('boost@:1.66.0')
  
      def cmake_args(self):
          args = ['-DBOOST_ROOT=%s' % self.spec['boost'].prefix]
          return args
  
new_contents: ##############################################################################
  # Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
  # Produced at the Lawrence Livermore National Laboratory.
  #
  # This file is part of Spack.
  # Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
  # LLNL-CODE-647188
  #
  # For details, see https://github.com/spack/spack
  # Please also see the NOTICE and LICENSE files for our notice and the LGPL.
  #
  # This program is free software; you can redistribute it and/or modify
  # it under the terms of the GNU Lesser General Public License (as
  # published by the Free Software Foundation) version 2.1, February 1999.
  #
  # This program is distributed in the hope that it will be useful, but
  # WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
  # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
  # conditions of the GNU Lesser General Public License for more details.
  #
  # You should have received a copy of the GNU Lesser General Public
  # License along with this program; if not, write to the Free Software
  # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
  ##############################################################################
  from spack import *
  
  
  class Salmon(CMakePackage):
      """Salmon is a tool for quantifying the expression of transcripts using
         RNA-seq data."""
  
      homepage = "http://combine-lab.github.io/salmon/"
      url      = "https://github.com/COMBINE-lab/salmon/archive/v0.8.2.tar.gz"
  
      version('0.9.1', '1277b8ed65d2c6982ed176a496a2a1e3')
      version('0.8.2', 'ee512697bc44b13661a16d4e14cf0a00')
  
      depends_on('tbb')
      depends_on('boost@:1.66.0')
  
      def patch(self):
          # remove static linking to libstdc++
          filter_file('-static-libstdc++', '', 'CMakeLists.txt', string=True)
  
      def cmake_args(self):
          args = ['-DBOOST_ROOT=%s' % self.spec['boost'].prefix]
          return args
  
subject: remove static link to libstdc++ (#9343)