old_contents: # Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
  # Spack Project Developers. See the top-level COPYRIGHT file for details.
  #
  # SPDX-License-Identifier: (Apache-2.0 OR MIT)
  
  from spack import *
  import os
  import tarfile
  
  
  class Avizo(Package):
      """Avizo is a 3D analysis software for scientific and industrial data.
      Wherever three-dimensional imaging data sets need to be processed, in
      materials science, geosciences or engineering applications, Avizo offers
      abundant state-of-the-art image data processing, exploration and analysis
      features within an intuitive workflow and easy-to-use graphical user
      interface."""
  
      homepage = "https://www.thermofisher.com/sa/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software.html"
      version('9.7.0', '9c9b9e81957387f4218df0c5adbb80717e9ae80ab3ca6ff8da523f7f499dcc5b',
              expand=False)
  
      def url_for_version(self, version):
          return "file://{0}/Avizo-{1}-Linux64-gcc44.bin".format(os.getcwd(),
                                                                 version.joined)
  
      # Licensing
      license_required = True
      license_comment = '#'
      license_files = ['share/license/password.dat']
      license_vars = ['MCSLMD_LICENSE_FILE']
  
      def setup_run_environment(self, env):
          run_env.set('MCSLMD_LICENSE_FILE', join_path(self.prefix.share.license,
                                                       'password.dat'))
  
      def install(self, spec, prefix):
          ver = self.version.joined
          sh = which('sh')
          sh('Avizo-{0}-Linux64-gcc44.bin'.format(ver), '--noexec', '--keep')
  
          with working_dir('Avizo'):
              avizo_tar = tarfile.open(name='Avizo-{0}-Linux64-gcc44.tar.bz2'
                                       .format(self.version))
              avizo_tar.extractall()
  
              with working_dir('Avizo-{0}'.format(self.version)):
                  install_tree('bin', prefix.bin)
                  install_tree('lib', prefix.lib)
                  install_tree('data', prefix.data)
                  install_tree('share', prefix.share)
                  install_tree('python', prefix.python)
  
new_contents: # Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
  # Spack Project Developers. See the top-level COPYRIGHT file for details.
  #
  # SPDX-License-Identifier: (Apache-2.0 OR MIT)
  
  from spack import *
  import os
  import tarfile
  
  
  class Avizo(Package):
      """Avizo is a 3D analysis software for scientific and industrial data.
      Wherever three-dimensional imaging data sets need to be processed, in
      materials science, geosciences or engineering applications, Avizo offers
      abundant state-of-the-art image data processing, exploration and analysis
      features within an intuitive workflow and easy-to-use graphical user
      interface."""
  
      homepage = "https://www.thermofisher.com/sa/en/home/industrial/electron-microscopy/electron-microscopy-instruments-workflow-solutions/3d-visualization-analysis-software.html"
      version('9.7.0', '9c9b9e81957387f4218df0c5adbb80717e9ae80ab3ca6ff8da523f7f499dcc5b',
              expand=False)
  
      def url_for_version(self, version):
          return "file://{0}/Avizo-{1}-Linux64-gcc44.bin".format(os.getcwd(),
                                                                 version.joined)
  
      # Licensing
      license_required = True
      license_comment = '#'
      license_files = ['share/license/password.dat']
      license_vars = ['MCSLMD_LICENSE_FILE']
  
      def setup_run_environment(self, env):
          env.set('MCSLMD_LICENSE_FILE', join_path(self.prefix.share.license,
                                                   'password.dat'))
  
      def install(self, spec, prefix):
          ver = self.version.joined
          sh = which('sh')
          sh('Avizo-{0}-Linux64-gcc44.bin'.format(ver), '--noexec', '--keep')
  
          with working_dir('Avizo'):
              avizo_tar = tarfile.open(name='Avizo-{0}-Linux64-gcc44.tar.bz2'
                                       .format(self.version))
              avizo_tar.extractall()
  
              with working_dir('Avizo-{0}'.format(self.version)):
                  install_tree('bin', prefix.bin)
                  install_tree('lib', prefix.lib)
                  install_tree('data', prefix.data)
                  install_tree('share', prefix.share)
                  install_tree('python', prefix.python)
  
subject: Fix run environment (#14908)