
RAWDATA_DIR = '/staging/as/skchoudh/pysradb_downloads/SRP010679'
OUT_DIR = '/staging/as/skchoudh/SRP010679_kallisto_cds_analysis'
CDNA_IDX = '/home/cmb-panasas2/skchoudh/genomes/homo_sapiens/cdna/gencode.v25.transcripts.kallisto.index'
CDS_IDX = '/home/cmb-panasas2/skchoudh/genomes/homo_sapiens/cds/gencode.v25.pc_transcripts.kallisto.index'
