Split (1)

train · 10k rows

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90	diet_pattern stringclasses 3 values	enterotype stringclasses 3 values	shannon_index float64 1.98 5.43	observed_richness int64 43 306	rel_abundance_Bacteroides float64 0 0.76	rel_abundance_Prevotella float64 0 0.78	rel_abundance_Faecalibacterium float64 0.05 0.38	rel_abundance_Ruminococcus float64 0.05 0.49	functional_SCFA_potential float64 1.22 5	functional_Bile_acid_potential float64 0.87 5	functional_Mucin_deg_potential float64 1.26 4.95
MICROBIOME_SAMPLE_00301	SSA_West	West	true	false	Female	69	High_fiber_plant_rich	Ruminococcus_like	4.47	150	0.192	0.2065	0.2501	0.3514	3.599617	2.676722	3.036115
MICROBIOME_SAMPLE_00302	SSA_West	West	true	false	Female	33	Mixed_transition	Ruminococcus_like	4.744	187	0.1622	0.2294	0.2206	0.3877	3.182435	3.517531	3.958007
MICROBIOME_SAMPLE_00303	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Bacteroides	3.872	180	0.6076	0.0638	0.1531	0.1756	3.206065	3.915472	2.647106
MICROBIOME_SAMPLE_00304	SSA_West	West	true	false	Female	46	Mixed_transition	Ruminococcus_like	4.298	195	0.1717	0.181	0.2793	0.3679	3.844321	3.097075	4.10168
MICROBIOME_SAMPLE_00305	SSA_West	West	true	false	Female	49	Westernized_high_fat_sugar	Bacteroides	3.433	193	0.6429	0.0514	0.1516	0.154	2.976851	3.644875	2.252247
MICROBIOME_SAMPLE_00306	SSA_West	West	true	false	Female	38	Mixed_transition	Prevotella	3.366	254	0.0871	0.6194	0.1492	0.1443	4.147814	2.325589	3.104843
MICROBIOME_SAMPLE_00307	SSA_West	West	true	false	Female	46	Mixed_transition	Prevotella	3.967	235	0.0387	0.6503	0.1708	0.1401	4.194198	2.795943	3.084613
MICROBIOME_SAMPLE_00308	SSA_West	West	true	false	Female	64	High_fiber_plant_rich	Bacteroides	4.397	191	0.6464	0.093	0.1517	0.109	2.900063	4.076297	1.679574
MICROBIOME_SAMPLE_00309	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	3.649	187	0.0631	0.6579	0.1667	0.1122	4.136847	3.321069	2.650117
MICROBIOME_SAMPLE_00310	SSA_West	West	true	false	Female	69	High_fiber_plant_rich	Prevotella	3.856	252	0.0609	0.6346	0.1345	0.1699	3.68073	2.52088	3.12502
MICROBIOME_SAMPLE_00311	SSA_West	West	true	false	Female	63	Mixed_transition	Ruminococcus_like	4.24	215	0.1619	0.187	0.2619	0.3893	3.407765	2.850607	3.591378
MICROBIOME_SAMPLE_00312	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	4.289	273	0.184	0.1917	0.2704	0.3538	3.017416	3.26604	3.694985
MICROBIOME_SAMPLE_00313	SSA_West	West	true	false	Female	69	High_fiber_plant_rich	Prevotella	3.903	158	0.0535	0.5835	0.1749	0.1881	3.225655	2.515705	3.009077
MICROBIOME_SAMPLE_00314	SSA_West	West	true	false	Female	55	Mixed_transition	Prevotella	4.509	204	0.1029	0.6336	0.1053	0.1582	3.614823	2.82184	2.049351
MICROBIOME_SAMPLE_00315	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Bacteroides	3.967	199	0.5978	0.092	0.1687	0.1415	3.443482	4.354836	2.475205
MICROBIOME_SAMPLE_00316	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	4.245	156	0.0523	0.6216	0.1407	0.1854	3.93916	2.361535	3.011264
MICROBIOME_SAMPLE_00317	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	4.456	201	0.0935	0.639	0.1523	0.1153	3.862346	3.172596	3.025667
MICROBIOME_SAMPLE_00318	SSA_West	West	true	false	Female	42	High_fiber_plant_rich	Ruminococcus_like	4.063	215	0.1797	0.1606	0.2585	0.4011	3.467112	3.213616	3.576353
MICROBIOME_SAMPLE_00319	SSA_West	West	true	false	Female	61	Mixed_transition	Bacteroides	4.527	181	0.6011	0.0873	0.167	0.1447	2.954634	3.214127	2.613258
MICROBIOME_SAMPLE_00320	SSA_West	West	true	false	Female	37	Mixed_transition	Bacteroides	4.538	185	0.6366	0.0282	0.1547	0.1805	2.904403	3.240326	3.07013
MICROBIOME_SAMPLE_00321	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Bacteroides	3.872	205	0.5658	0.0895	0.1927	0.152	2.369328	3.984428	3.378056
MICROBIOME_SAMPLE_00322	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	3.463	204	0.0654	0.6392	0.1458	0.1496	3.750243	2.475386	2.830605
MICROBIOME_SAMPLE_00323	SSA_West	West	true	false	Female	63	High_fiber_plant_rich	Prevotella	3.847	203	0.101	0.6694	0.145	0.0846	4.205491	2.035231	2.865505
MICROBIOME_SAMPLE_00324	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Prevotella	4.837	158	0.0358	0.6906	0.1586	0.1149	3.993359	2.639016	2.407939
MICROBIOME_SAMPLE_00325	SSA_West	West	true	false	Female	70	Mixed_transition	Bacteroides	4.015	214	0.5869	0.0762	0.2162	0.1206	2.338803	4.071236	2.995217
MICROBIOME_SAMPLE_00326	SSA_West	West	true	false	Female	58	Mixed_transition	Prevotella	4.227	121	0.0704	0.5947	0.1731	0.1618	3.364124	2.940127	3.275747
MICROBIOME_SAMPLE_00327	SSA_West	West	true	false	Female	33	High_fiber_plant_rich	Prevotella	4.657	121	0.0794	0.636	0.1324	0.1522	4.041262	2.086384	2.576388
MICROBIOME_SAMPLE_00328	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	3.49	194	0.6162	0.0411	0.1604	0.1824	2.60806	3.373504	2.792721
MICROBIOME_SAMPLE_00329	SSA_West	West	true	false	Female	37	Westernized_high_fat_sugar	Prevotella	4.677	155	0.0953	0.6456	0.1092	0.1499	4.767471	2.878346	2.49462
MICROBIOME_SAMPLE_00330	SSA_West	West	true	false	Female	44	High_fiber_plant_rich	Prevotella	3.408	131	0.0784	0.6692	0.0933	0.1591	4.434785	2.312679	2.923925
MICROBIOME_SAMPLE_00331	SSA_West	West	true	false	Female	67	Mixed_transition	Prevotella	3.433	158	0.0587	0.6037	0.1804	0.1572	3.55611	2.314266	3.352157
MICROBIOME_SAMPLE_00332	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Bacteroides	4.653	233	0.5622	0.1045	0.1247	0.2085	2.69634	4.258718	2.455196
MICROBIOME_SAMPLE_00333	SSA_West	West	true	false	Female	42	High_fiber_plant_rich	Prevotella	3.728	156	0.0681	0.7003	0.094	0.1376	4.523949	1.907148	3.40156
MICROBIOME_SAMPLE_00334	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Prevotella	4.041	256	0.0578	0.6458	0.1119	0.1845	3.458104	2.875186	2.927916
MICROBIOME_SAMPLE_00335	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Bacteroides	3.78	195	0.5865	0.12	0.1239	0.1696	2.1861	3.586718	2.450467
MICROBIOME_SAMPLE_00336	SSA_West	West	true	false	Female	37	Mixed_transition	Prevotella	3.771	174	0.028	0.6289	0.1929	0.1502	4.36136	2.036023	2.818663
MICROBIOME_SAMPLE_00337	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Bacteroides	4.26	212	0.6091	0.0696	0.1806	0.1406	2.460472	4.376616	2.157213
MICROBIOME_SAMPLE_00338	SSA_West	West	true	false	Female	53	Westernized_high_fat_sugar	Bacteroides	4.255	235	0.5762	0.1285	0.1498	0.1455	2.260025	4.580542	2.539884
MICROBIOME_SAMPLE_00339	SSA_West	West	true	false	Female	63	High_fiber_plant_rich	Prevotella	4.257	218	0.1091	0.6031	0.1559	0.1319	4.293493	2.386337	2.891916
MICROBIOME_SAMPLE_00340	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Bacteroides	4.302	208	0.5625	0.0848	0.1891	0.1635	2.517099	3.981229	3.165079
MICROBIOME_SAMPLE_00341	SSA_West	West	true	false	Female	25	High_fiber_plant_rich	Ruminococcus_like	3.79	222	0.185	0.1829	0.229	0.4031	2.684657	2.422892	3.863881
MICROBIOME_SAMPLE_00342	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Bacteroides	4.501	218	0.5839	0.1125	0.1418	0.1618	2.098492	3.315588	3.067618
MICROBIOME_SAMPLE_00343	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Bacteroides	4.863	256	0.6693	0.0342	0.1601	0.1365	2.635805	3.425481	2.12151
MICROBIOME_SAMPLE_00344	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	3.18	179	0.0945	0.6439	0.1158	0.1458	3.668558	2.474263	2.486868
MICROBIOME_SAMPLE_00345	SSA_West	West	true	false	Female	68	High_fiber_plant_rich	Bacteroides	4.095	247	0.6158	0.0916	0.1334	0.1592	2.490079	3.811862	2.859578
MICROBIOME_SAMPLE_00346	SSA_West	West	true	false	Female	27	High_fiber_plant_rich	Prevotella	3.905	172	0.0686	0.5678	0.1667	0.197	3.772823	2.517601	3.315203
MICROBIOME_SAMPLE_00347	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Ruminococcus_like	4.795	214	0.1773	0.2151	0.2758	0.3318	2.809348	2.802667	3.881929
MICROBIOME_SAMPLE_00348	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Ruminococcus_like	4.807	184	0.1907	0.1663	0.3005	0.3425	3.218464	2.928479	3.393851
MICROBIOME_SAMPLE_00349	SSA_West	West	true	false	Female	33	High_fiber_plant_rich	Ruminococcus_like	4.223	171	0.1657	0.1823	0.2804	0.3715	3.895318	3.264952	4.243126
MICROBIOME_SAMPLE_00350	SSA_West	West	true	false	Female	66	High_fiber_plant_rich	Prevotella	3.947	170	0.1389	0.6499	0.0828	0.1284	3.196671	2.01947	2.556534
MICROBIOME_SAMPLE_00351	SSA_West	West	true	false	Male	54	High_fiber_plant_rich	Prevotella	4.578	124	0.0664	0.6207	0.1631	0.1498	4.474749	2.255419	2.714101
MICROBIOME_SAMPLE_00352	SSA_West	West	true	false	Female	59	Westernized_high_fat_sugar	Prevotella	4.43	201	0.0726	0.5968	0.1437	0.1869	3.902971	2.254204	2.723578
MICROBIOME_SAMPLE_00353	SSA_West	West	true	false	Female	44	Mixed_transition	Ruminococcus_like	4.046	221	0.1511	0.1752	0.3246	0.349	2.304309	2.436046	3.299599
MICROBIOME_SAMPLE_00354	SSA_West	West	true	false	Female	59	Westernized_high_fat_sugar	Bacteroides	3.982	231	0.5954	0.0722	0.1643	0.1682	2.658722	2.835491	2.633317
MICROBIOME_SAMPLE_00355	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Ruminococcus_like	4.389	198	0.1737	0.2077	0.2828	0.3359	4.058167	2.748721	2.925823
MICROBIOME_SAMPLE_00356	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	3.114	167	0.0823	0.6495	0.1222	0.1459	4.049229	2.68603	2.6434
MICROBIOME_SAMPLE_00357	SSA_West	West	true	false	Female	53	Mixed_transition	Ruminococcus_like	3.899	249	0.1675	0.1829	0.2632	0.3864	3.255345	3.282617	3.392545
MICROBIOME_SAMPLE_00358	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	3.809	136	0.0876	0.6309	0.1342	0.1473	4.350493	2.440484	3.457444
MICROBIOME_SAMPLE_00359	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Prevotella	3.913	213	0.0286	0.6416	0.149	0.1808	3.983772	2.179872	3.162842
MICROBIOME_SAMPLE_00360	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	3.301	126	0.0784	0.6824	0.105	0.1342	3.86062	3.168213	3.803478
MICROBIOME_SAMPLE_00361	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.448	145	0.0897	0.6026	0.1355	0.1722	4.032373	2.840999	3.419705
MICROBIOME_SAMPLE_00362	SSA_West	West	true	false	Female	54	Mixed_transition	Ruminococcus_like	4.565	232	0.1757	0.1802	0.2806	0.3635	3.078326	3.38234	3.261411
MICROBIOME_SAMPLE_00363	SSA_West	West	true	false	Female	61	Mixed_transition	Bacteroides	3.756	164	0.6391	0.0462	0.1543	0.1604	2.578313	4.068596	2.731593
MICROBIOME_SAMPLE_00364	SSA_West	West	true	false	Female	38	Mixed_transition	Prevotella	3.882	251	0.0858	0.6384	0.1565	0.1193	4.103112	2.309721	2.569252
MICROBIOME_SAMPLE_00365	SSA_West	West	true	false	Female	49	Mixed_transition	Ruminococcus_like	4.387	193	0.1737	0.1671	0.3031	0.356	2.762153	2.987034	3.384012
MICROBIOME_SAMPLE_00366	SSA_West	West	true	false	Female	66	High_fiber_plant_rich	Prevotella	3.944	174	0.0495	0.5958	0.189	0.1656	4.776768	2.172923	3.569875
MICROBIOME_SAMPLE_00367	SSA_West	West	true	false	Female	42	Westernized_high_fat_sugar	Bacteroides	4.283	178	0.6513	0.0938	0.1016	0.1533	2.948962	3.910969	2.787788
MICROBIOME_SAMPLE_00368	SSA_West	West	true	false	Female	41	Westernized_high_fat_sugar	Bacteroides	4.061	183	0.5798	0.1025	0.1604	0.1574	3.420314	3.98952	3.080199
MICROBIOME_SAMPLE_00369	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Ruminococcus_like	3.676	198	0.0927	0.2092	0.3101	0.3881	3.163053	2.499532	3.954241
MICROBIOME_SAMPLE_00370	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	4.318	194	0.0603	0.6204	0.1406	0.1787	4.187819	2.386237	3.240974
MICROBIOME_SAMPLE_00371	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Prevotella	4.16	211	0.0574	0.5962	0.1649	0.1816	3.563248	2.471717	2.720452
MICROBIOME_SAMPLE_00372	SSA_West	West	true	false	Female	65	High_fiber_plant_rich	Prevotella	5.431	179	0.1042	0.6229	0.1428	0.13	4.037935	2.404082	3.35332
MICROBIOME_SAMPLE_00373	SSA_West	West	true	false	Female	59	Westernized_high_fat_sugar	Bacteroides	3.987	130	0.5991	0.1023	0.1254	0.1732	1.966537	3.809582	2.549497
MICROBIOME_SAMPLE_00374	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	4.069	176	0.063	0.6291	0.1166	0.1913	3.745934	2.496024	3.128483
MICROBIOME_SAMPLE_00375	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	4.318	183	0.1095	0.6077	0.1254	0.1573	4.320587	2.529049	2.849123
MICROBIOME_SAMPLE_00376	SSA_West	West	true	false	Female	76	High_fiber_plant_rich	Bacteroides	4.196	159	0.5843	0.123	0.1312	0.1616	3.140363	4.016843	2.296943
MICROBIOME_SAMPLE_00377	SSA_West	West	true	false	Female	48	Mixed_transition	Prevotella	3.684	171	0.0838	0.6504	0.1627	0.1031	3.91584	2.671075	3.172429
MICROBIOME_SAMPLE_00378	SSA_West	West	true	false	Female	28	Mixed_transition	Ruminococcus_like	4.185	144	0.2311	0.1897	0.2502	0.329	2.946777	2.375228	3.597912
MICROBIOME_SAMPLE_00379	SSA_West	West	true	false	Female	68	High_fiber_plant_rich	Ruminococcus_like	4.315	224	0.1721	0.2007	0.2911	0.3361	3.327411	2.77701	3.00495
MICROBIOME_SAMPLE_00380	SSA_West	West	true	false	Female	45	Mixed_transition	Ruminococcus_like	4.375	169	0.2407	0.1734	0.2434	0.3425	3.828477	2.555581	3.099551
MICROBIOME_SAMPLE_00381	SSA_West	West	true	false	Female	51	Westernized_high_fat_sugar	Bacteroides	3.807	152	0.5525	0.0783	0.1727	0.1965	1.842407	3.269847	2.55218
MICROBIOME_SAMPLE_00382	SSA_West	West	true	false	Female	64	High_fiber_plant_rich	Prevotella	4.249	147	0.0117	0.6924	0.1505	0.1454	3.847827	2.100658	2.508943
MICROBIOME_SAMPLE_00383	SSA_West	West	true	false	Female	32	Mixed_transition	Prevotella	3.99	189	0.091	0.6141	0.1696	0.1254	3.935241	3.057239	2.512309
MICROBIOME_SAMPLE_00384	SSA_West	West	true	false	Female	36	High_fiber_plant_rich	Ruminococcus_like	4.224	186	0.2417	0.1691	0.2613	0.3278	3.260433	3.385647	3.289878
MICROBIOME_SAMPLE_00385	SSA_West	West	true	false	Female	32	High_fiber_plant_rich	Ruminococcus_like	3.669	216	0.1854	0.2205	0.243	0.3511	3.063986	2.407087	3.844568
MICROBIOME_SAMPLE_00386	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Prevotella	4.27	183	0.08	0.6417	0.1293	0.149	4.292473	2.022127	3.038478
MICROBIOME_SAMPLE_00387	SSA_West	West	true	false	Female	55	Westernized_high_fat_sugar	Ruminococcus_like	4.326	175	0.1645	0.1962	0.2818	0.3575	2.54438	2.212737	3.695517
MICROBIOME_SAMPLE_00388	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	3.927	202	0.0687	0.6522	0.1473	0.1318	3.508151	2.706453	3.537419
MICROBIOME_SAMPLE_00389	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Prevotella	3.807	171	0.072	0.6951	0.1239	0.109	4.019977	0.987836	2.859737
MICROBIOME_SAMPLE_00390	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Prevotella	4.519	227	0.0653	0.6476	0.1269	0.1603	3.341654	2.95742	2.767748
MICROBIOME_SAMPLE_00391	SSA_West	West	true	false	Female	25	High_fiber_plant_rich	Bacteroides	3.73	123	0.6183	0.0688	0.1639	0.1489	2.78739	3.665023	2.518582
MICROBIOME_SAMPLE_00392	SSA_West	West	true	false	Female	51	Mixed_transition	Bacteroides	4.273	288	0.6807	0.0226	0.1525	0.1442	3.112052	3.673701	2.785716
MICROBIOME_SAMPLE_00393	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	4.937	192	0.0456	0.6911	0.1199	0.1433	3.418953	2.084512	2.733465
MICROBIOME_SAMPLE_00394	SSA_West	West	true	false	Female	55	Mixed_transition	Prevotella	4.355	189	0.096	0.6246	0.1232	0.1562	3.888341	2.394462	2.834346
MICROBIOME_SAMPLE_00395	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Ruminococcus_like	3.85	128	0.1551	0.1484	0.3014	0.395	2.78757	2.698198	2.808396
MICROBIOME_SAMPLE_00396	SSA_West	West	true	false	Male	52	Mixed_transition	Ruminococcus_like	4.416	207	0.2086	0.1286	0.2556	0.4072	2.98457	2.348974	3.723196
MICROBIOME_SAMPLE_00397	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Prevotella	4.093	180	0.1077	0.5912	0.1794	0.1216	4.064948	2.468728	2.729152
MICROBIOME_SAMPLE_00398	SSA_West	West	true	false	Female	53	Mixed_transition	Bacteroides	3.694	259	0.5647	0.1058	0.1744	0.1551	2.545728	3.877513	2.828868
MICROBIOME_SAMPLE_00399	SSA_West	West	true	false	Female	56	Mixed_transition	Prevotella	3.373	243	0	0.6957	0.1461	0.1582	3.544013	2.540271	2.982407
MICROBIOME_SAMPLE_00400	SSA_West	West	true	false	Female	42	Mixed_transition	Prevotella	4.639	138	0.0957	0.6176	0.1432	0.1436	4.682535	2.502042	2.586351

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