Split (1)

train · 10k rows

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90	diet_pattern stringclasses 3 values	enterotype stringclasses 3 values	shannon_index float64 1.98 5.43	observed_richness int64 43 306	rel_abundance_Bacteroides float64 0 0.76	rel_abundance_Prevotella float64 0 0.78	rel_abundance_Faecalibacterium float64 0.05 0.38	rel_abundance_Ruminococcus float64 0.05 0.49	functional_SCFA_potential float64 1.22 5	functional_Bile_acid_potential float64 0.87 5	functional_Mucin_deg_potential float64 1.26 4.95
MICROBIOME_SAMPLE_00401	SSA_West	West	true	false	Female	48	Mixed_transition	Ruminococcus_like	4.279	136	0.2076	0.1475	0.2988	0.3461	3.087407	2.782077	4.007565
MICROBIOME_SAMPLE_00402	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Bacteroides	5.258	192	0.6371	0.0533	0.1853	0.1242	2.592634	4.014751	2.877692
MICROBIOME_SAMPLE_00403	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	4.345	177	0.0328	0.6677	0.1453	0.1541	4.211697	2.586261	2.592731
MICROBIOME_SAMPLE_00404	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Bacteroides	3.883	176	0.6305	0.0842	0.1822	0.1031	2.1719	3.231309	2.915341
MICROBIOME_SAMPLE_00405	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Ruminococcus_like	4.387	197	0.1609	0.1887	0.3013	0.3491	2.304425	3.459093	3.560106
MICROBIOME_SAMPLE_00406	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Ruminococcus_like	3.981	159	0.1505	0.1934	0.277	0.3791	3.495851	3.102229	3.201794
MICROBIOME_SAMPLE_00407	SSA_West	West	true	false	Female	49	Westernized_high_fat_sugar	Prevotella	4.001	210	0.0438	0.7203	0.1679	0.068	4.03414	2.816295	3.055482
MICROBIOME_SAMPLE_00408	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	4.171	217	0.0313	0.6319	0.1916	0.1452	4.611161	3.594237	2.703186
MICROBIOME_SAMPLE_00409	SSA_West	West	true	false	Female	28	High_fiber_plant_rich	Prevotella	4.54	233	0.1289	0.6069	0.1483	0.1159	2.997206	2.384139	2.438498
MICROBIOME_SAMPLE_00410	SSA_West	West	true	false	Female	36	Westernized_high_fat_sugar	Bacteroides	3.804	199	0.5618	0.0676	0.1894	0.1812	2.326269	4.443764	3.304881
MICROBIOME_SAMPLE_00411	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Prevotella	4.08	167	0.0548	0.668	0.1525	0.1247	3.629602	2.096756	2.834458
MICROBIOME_SAMPLE_00412	SSA_West	West	true	false	Female	24	Mixed_transition	Bacteroides	4.461	197	0.6084	0.1065	0.1765	0.1086	2.166395	3.708193	2.742389
MICROBIOME_SAMPLE_00413	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Prevotella	4.781	165	0.0569	0.6433	0.1212	0.1785	2.892068	2.198572	3.359283
MICROBIOME_SAMPLE_00414	SSA_West	West	true	false	Female	58	Westernized_high_fat_sugar	Ruminococcus_like	4.979	193	0.1962	0.236	0.2513	0.3165	3.560986	3.473687	3.384474
MICROBIOME_SAMPLE_00415	SSA_West	West	true	false	Female	47	Mixed_transition	Prevotella	3.992	232	0.0781	0.6874	0.1173	0.1172	4.341795	1.947864	2.946651
MICROBIOME_SAMPLE_00416	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	4.261	232	0.0751	0.6548	0.1438	0.1263	4.027663	2.289318	2.694696
MICROBIOME_SAMPLE_00417	SSA_West	West	true	false	Female	62	Mixed_transition	Bacteroides	4.231	237	0.6472	0.0574	0.1582	0.1372	2.007134	3.942304	2.17914
MICROBIOME_SAMPLE_00418	SSA_West	West	true	false	Female	65	High_fiber_plant_rich	Prevotella	4.168	135	0.0884	0.6155	0.1256	0.1706	3.871372	2.444341	2.820554
MICROBIOME_SAMPLE_00419	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	4.434	174	0.1078	0.627	0.1237	0.1415	4.41872	1.931939	3.256594
MICROBIOME_SAMPLE_00420	SSA_West	West	true	false	Female	65	High_fiber_plant_rich	Bacteroides	4.539	162	0.6139	0.064	0.1419	0.1802	2.670372	4.275548	1.818737
MICROBIOME_SAMPLE_00421	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Bacteroides	4.533	217	0.6348	0.1093	0.1681	0.0877	3.176881	3.464934	2.72545
MICROBIOME_SAMPLE_00422	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Bacteroides	3.658	122	0.6333	0.1109	0.1185	0.1373	2.767219	3.38903	2.382781
MICROBIOME_SAMPLE_00423	SSA_West	West	true	false	Female	43	Mixed_transition	Prevotella	3.681	195	0.0862	0.6313	0.1551	0.1274	4.049566	2.689232	2.829496
MICROBIOME_SAMPLE_00424	SSA_West	West	true	false	Female	34	Mixed_transition	Prevotella	4.463	204	0.1058	0.6726	0.0979	0.1237	3.915497	2.365111	3.043096
MICROBIOME_SAMPLE_00425	SSA_West	West	true	false	Female	40	Westernized_high_fat_sugar	Prevotella	4.059	190	0.0551	0.647	0.1467	0.1513	3.965238	3.062062	2.849476
MICROBIOME_SAMPLE_00426	SSA_West	West	true	false	Female	46	Mixed_transition	Prevotella	4.032	209	0.0378	0.6564	0.1584	0.1474	3.67639	2.448741	2.98364
MICROBIOME_SAMPLE_00427	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Bacteroides	4.187	154	0.6075	0.095	0.1559	0.1417	2.238772	3.394715	2.547298
MICROBIOME_SAMPLE_00428	SSA_West	West	true	false	Female	69	High_fiber_plant_rich	Bacteroides	3.567	215	0.5801	0.0752	0.133	0.2117	2.146357	3.925445	2.32587
MICROBIOME_SAMPLE_00429	SSA_West	West	true	false	Female	35	High_fiber_plant_rich	Prevotella	4.602	215	0.0485	0.6827	0.1492	0.1195	4.082216	2.652333	3.137118
MICROBIOME_SAMPLE_00430	SSA_West	West	true	false	Female	54	Mixed_transition	Prevotella	4.447	160	0.1154	0.613	0.1453	0.1262	4.022354	2.270494	2.822246
MICROBIOME_SAMPLE_00431	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Bacteroides	4.571	131	0.6203	0.074	0.1426	0.1631	1.902885	3.7955	2.631792
MICROBIOME_SAMPLE_00432	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	4.279	227	0.1837	0.162	0.3461	0.3082	3.509381	3.097309	4.204925
MICROBIOME_SAMPLE_00433	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	4.302	153	0.0465	0.6341	0.17	0.1493	3.917306	2.94888	2.107028
MICROBIOME_SAMPLE_00434	SSA_West	West	true	false	Female	30	High_fiber_plant_rich	Bacteroides	4.583	187	0.6121	0.0698	0.1758	0.1423	2.763965	3.905405	2.735083
MICROBIOME_SAMPLE_00435	SSA_West	West	true	false	Female	60	Westernized_high_fat_sugar	Bacteroides	4.073	197	0.6049	0.0634	0.1347	0.197	2.571712	4.775179	2.81131
MICROBIOME_SAMPLE_00436	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Ruminococcus_like	4.144	237	0.149	0.1243	0.3055	0.4212	3.314362	3.26899	3.610175
MICROBIOME_SAMPLE_00437	SSA_West	West	true	false	Female	44	High_fiber_plant_rich	Prevotella	4.627	196	0.0333	0.6208	0.1556	0.1903	3.217462	2.544493	2.527117
MICROBIOME_SAMPLE_00438	SSA_West	West	true	false	Female	38	High_fiber_plant_rich	Ruminococcus_like	4.007	212	0.215	0.1693	0.2158	0.4	3.531478	3.225503	3.123613
MICROBIOME_SAMPLE_00439	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Ruminococcus_like	4.051	193	0.1588	0.1728	0.2594	0.409	3.063688	3.14912	3.04324
MICROBIOME_SAMPLE_00440	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Bacteroides	4.175	133	0.6521	0.0719	0.1677	0.1083	2.861886	3.680503	2.686845
MICROBIOME_SAMPLE_00441	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Bacteroides	3.944	238	0.6595	0.0845	0.1309	0.1251	2.710662	4.080276	2.68359
MICROBIOME_SAMPLE_00442	SSA_West	West	true	false	Female	54	Mixed_transition	Prevotella	4.172	131	0.0743	0.657	0.1085	0.1601	4.576416	2.124115	3.086776
MICROBIOME_SAMPLE_00443	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	4.415	128	0.0916	0.6805	0.1086	0.1193	4.241601	2.278915	3.344775
MICROBIOME_SAMPLE_00444	SSA_West	West	true	false	Female	65	High_fiber_plant_rich	Bacteroides	4.032	200	0.6003	0.0875	0.1321	0.1801	2.863078	3.954094	2.636679
MICROBIOME_SAMPLE_00445	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Ruminococcus_like	4.197	247	0.1884	0.1835	0.2492	0.3788	3.12197	3.52372	3.054552
MICROBIOME_SAMPLE_00446	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Prevotella	4.834	183	0.061	0.6382	0.1279	0.1729	4.20955	2.139519	2.661738
MICROBIOME_SAMPLE_00447	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Ruminococcus_like	4.56	245	0.2234	0.2381	0.2375	0.301	3.933396	2.614282	2.988562
MICROBIOME_SAMPLE_00448	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	3.306	140	0.0548	0.622	0.177	0.1462	4.230809	2.587012	2.817291
MICROBIOME_SAMPLE_00449	SSA_West	West	true	false	Female	62	Mixed_transition	Prevotella	3.973	131	0.087	0.6117	0.155	0.1463	3.455852	2.503359	2.976528
MICROBIOME_SAMPLE_00450	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Bacteroides	3.839	211	0.597	0.0441	0.1754	0.1835	2.842479	3.717122	1.824214
MICROBIOME_SAMPLE_00451	SSA_West	West	true	false	Female	49	Mixed_transition	Prevotella	4.334	264	0.0736	0.6328	0.1494	0.1443	4.940245	2.062734	2.512509
MICROBIOME_SAMPLE_00452	SSA_West	West	true	false	Female	54	Westernized_high_fat_sugar	Prevotella	3.869	205	0.0909	0.5926	0.1532	0.1634	4.123293	2.21718	2.958888
MICROBIOME_SAMPLE_00453	SSA_West	West	true	false	Female	71	Mixed_transition	Prevotella	3.887	207	0.0294	0.6653	0.1385	0.1668	4.280701	2.966799	3.435028
MICROBIOME_SAMPLE_00454	SSA_West	West	true	false	Female	73	Mixed_transition	Prevotella	3.769	201	0.0732	0.6266	0.1229	0.1772	3.410926	2.163814	2.469157
MICROBIOME_SAMPLE_00455	SSA_West	West	true	false	Female	51	Mixed_transition	Prevotella	3.985	194	0.088	0.6163	0.1497	0.146	3.547676	2.214274	3.041834
MICROBIOME_SAMPLE_00456	SSA_West	West	true	false	Female	52	Mixed_transition	Bacteroides	4.938	207	0.6218	0.0773	0.1551	0.1458	2.753182	3.971795	2.130497
MICROBIOME_SAMPLE_00457	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Ruminococcus_like	4.011	230	0.1915	0.1586	0.3234	0.3265	2.39922	3.181096	2.688595
MICROBIOME_SAMPLE_00458	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Bacteroides	3.916	210	0.592	0.1055	0.104	0.1985	2.409858	4.412463	2.263795
MICROBIOME_SAMPLE_00459	SSA_West	West	true	false	Female	54	Westernized_high_fat_sugar	Prevotella	3.382	192	0.0957	0.5972	0.158	0.149	3.671893	2.706567	2.937134
MICROBIOME_SAMPLE_00460	SSA_West	West	true	false	Female	50	Westernized_high_fat_sugar	Prevotella	4.077	240	0.0565	0.6246	0.1225	0.1964	3.742925	2.918735	2.487445
MICROBIOME_SAMPLE_00461	SSA_West	West	true	false	Female	53	Westernized_high_fat_sugar	Prevotella	4.593	228	0.0727	0.6181	0.1864	0.1228	3.09291	1.656574	2.253975
MICROBIOME_SAMPLE_00462	SSA_West	West	true	false	Female	41	Mixed_transition	Ruminococcus_like	3.284	163	0.1759	0.2262	0.232	0.366	3.099964	4.042865	3.457816
MICROBIOME_SAMPLE_00463	SSA_West	West	true	false	Female	33	High_fiber_plant_rich	Prevotella	3.934	223	0.0413	0.6306	0.1492	0.1789	3.767689	2.474596	2.411721
MICROBIOME_SAMPLE_00464	SSA_West	West	true	false	Female	27	High_fiber_plant_rich	Ruminococcus_like	4.108	196	0.1434	0.1452	0.2934	0.4181	3.425751	2.854827	3.698151
MICROBIOME_SAMPLE_00465	SSA_West	West	true	false	Female	38	Mixed_transition	Prevotella	4.224	183	0.063	0.6019	0.178	0.1571	4.330074	2.218503	2.54073
MICROBIOME_SAMPLE_00466	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	4.789	104	0.1336	0.6188	0.1596	0.088	3.905238	2.729139	2.430101
MICROBIOME_SAMPLE_00467	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	4.08	240	0.0641	0.6143	0.1562	0.1654	3.716501	2.7778	2.691306
MICROBIOME_SAMPLE_00468	SSA_West	West	true	false	Female	71	High_fiber_plant_rich	Prevotella	4.438	201	0.0432	0.6283	0.1466	0.1819	4.179879	2.496813	2.897189
MICROBIOME_SAMPLE_00469	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Ruminococcus_like	4.412	220	0.1783	0.2088	0.2221	0.3909	3.14675	3.503693	3.320543
MICROBIOME_SAMPLE_00470	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Bacteroides	3.186	182	0.6213	0.0815	0.1589	0.1382	2.470509	3.349462	1.801358
MICROBIOME_SAMPLE_00471	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	4.532	114	0.075	0.6614	0.1294	0.1342	4.170539	2.601808	2.736597
MICROBIOME_SAMPLE_00472	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	3.337	219	0.0594	0.6336	0.126	0.1811	4.099604	2.271305	2.760039
MICROBIOME_SAMPLE_00473	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Ruminococcus_like	3.573	228	0.1841	0.2163	0.2688	0.3308	3.608011	3.091908	3.701982
MICROBIOME_SAMPLE_00474	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	3.93	167	0.0887	0.6502	0.1398	0.1213	4.203336	2.099138	2.385307
MICROBIOME_SAMPLE_00475	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Bacteroides	3.908	199	0.5852	0.0847	0.1608	0.1693	1.83687	3.349111	2.821955
MICROBIOME_SAMPLE_00476	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Bacteroides	3.482	173	0.5993	0.0811	0.1532	0.1664	2.554138	4.348935	3.276484
MICROBIOME_SAMPLE_00477	SSA_West	West	true	false	Female	62	High_fiber_plant_rich	Prevotella	4.419	210	0.0629	0.6845	0.1028	0.1498	3.415879	2.603192	2.453617
MICROBIOME_SAMPLE_00478	SSA_West	West	true	false	Female	37	High_fiber_plant_rich	Prevotella	4.13	168	0.0644	0.6658	0.1286	0.1412	3.777284	2.808171	2.931132
MICROBIOME_SAMPLE_00479	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Prevotella	4.004	239	0.0685	0.5889	0.1533	0.1893	4.478772	1.958827	2.792509
MICROBIOME_SAMPLE_00480	SSA_West	West	true	false	Female	79	High_fiber_plant_rich	Ruminococcus_like	4.252	178	0.1595	0.2324	0.249	0.3591	2.748088	3.244885	3.442589
MICROBIOME_SAMPLE_00481	SSA_West	West	true	false	Female	52	Mixed_transition	Ruminococcus_like	3.599	174	0.183	0.1979	0.221	0.3981	2.842305	2.741034	3.869484
MICROBIOME_SAMPLE_00482	SSA_West	West	true	false	Female	66	High_fiber_plant_rich	Prevotella	4.227	161	0.0529	0.6113	0.1794	0.1563	4.754349	2.123467	2.267966
MICROBIOME_SAMPLE_00483	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	3.358	158	0.0496	0.6724	0.1538	0.1243	4.071924	1.942078	2.72943
MICROBIOME_SAMPLE_00484	SSA_West	West	true	false	Female	56	Mixed_transition	Prevotella	3.78	214	0.067	0.6036	0.1834	0.1459	3.852738	2.166506	2.427531
MICROBIOME_SAMPLE_00485	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	3.334	142	0.059	0.6367	0.15	0.1542	3.951077	2.62007	2.666035
MICROBIOME_SAMPLE_00486	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.214	193	0.0384	0.6593	0.1464	0.1558	4.127247	2.111526	3.205458
MICROBIOME_SAMPLE_00487	SSA_West	West	true	false	Female	41	Westernized_high_fat_sugar	Prevotella	3.643	167	0.0283	0.6249	0.1702	0.1767	3.564263	2.714722	2.9338
MICROBIOME_SAMPLE_00488	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	3.923	232	0.161	0.217	0.2883	0.3336	2.979126	3.612653	3.330652
MICROBIOME_SAMPLE_00489	SSA_West	West	true	false	Female	41	Westernized_high_fat_sugar	Ruminococcus_like	3.921	145	0.1468	0.2461	0.2919	0.3153	3.533584	2.285259	3.06955
MICROBIOME_SAMPLE_00490	SSA_West	West	true	false	Female	57	Mixed_transition	Prevotella	4.426	173	0.0681	0.6309	0.173	0.128	3.912553	2.067981	3.166063
MICROBIOME_SAMPLE_00491	SSA_West	West	true	false	Female	62	Westernized_high_fat_sugar	Bacteroides	3.941	148	0.6455	0.0404	0.1179	0.1962	2.533762	3.776038	2.772674
MICROBIOME_SAMPLE_00492	SSA_West	West	true	false	Female	54	Mixed_transition	Prevotella	3.941	176	0.0992	0.6212	0.1304	0.1493	4.732502	2.429713	2.792221
MICROBIOME_SAMPLE_00493	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Bacteroides	4.574	172	0.6236	0.0214	0.1917	0.1632	1.879645	4.280739	2.46506
MICROBIOME_SAMPLE_00494	SSA_West	West	true	false	Female	55	Mixed_transition	Ruminococcus_like	4.297	208	0.174	0.161	0.3559	0.3091	2.911425	3.283303	2.994224
MICROBIOME_SAMPLE_00495	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Ruminococcus_like	4.342	207	0.1944	0.1616	0.2719	0.3722	3.538487	3.170343	3.028863
MICROBIOME_SAMPLE_00496	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Ruminococcus_like	3.972	150	0.1576	0.2636	0.2294	0.3494	3.404161	2.811999	3.462223
MICROBIOME_SAMPLE_00497	SSA_West	West	true	false	Female	30	Mixed_transition	Ruminococcus_like	3.913	185	0.1904	0.194	0.2589	0.3567	3.344633	2.963109	3.157905
MICROBIOME_SAMPLE_00498	SSA_West	West	true	false	Female	46	Mixed_transition	Prevotella	3.268	161	0.0521	0.5758	0.1602	0.2118	3.016472	2.521763	2.927834
MICROBIOME_SAMPLE_00499	SSA_West	West	true	false	Female	28	Mixed_transition	Prevotella	4.16	177	0.0698	0.6363	0.1507	0.1432	3.766621	3.527657	3.043805
MICROBIOME_SAMPLE_00500	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Bacteroides	4.176	196	0.6339	0.0625	0.1495	0.1542	2.172064	3.817542	3.158943

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