Split (1)

train · 10k rows

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90	diet_pattern stringclasses 3 values	enterotype stringclasses 3 values	shannon_index float64 1.98 5.43	observed_richness int64 43 306	rel_abundance_Bacteroides float64 0 0.76	rel_abundance_Prevotella float64 0 0.78	rel_abundance_Faecalibacterium float64 0.05 0.38	rel_abundance_Ruminococcus float64 0.05 0.49	functional_SCFA_potential float64 1.22 5	functional_Bile_acid_potential float64 0.87 5	functional_Mucin_deg_potential float64 1.26 4.95
MICROBIOME_SAMPLE_00601	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	4.285	131	0.0921	0.6486	0.0992	0.1602	3.973868	2.961525	2.972688
MICROBIOME_SAMPLE_00602	SSA_West	West	true	false	Female	44	Mixed_transition	Prevotella	4.508	159	0.075	0.6217	0.1572	0.1461	3.754385	2.264827	3.559401
MICROBIOME_SAMPLE_00603	SSA_West	West	true	false	Female	64	Mixed_transition	Ruminococcus_like	4.597	210	0.2299	0.1958	0.26	0.3144	3.361067	3.272673	3.4014
MICROBIOME_SAMPLE_00604	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Ruminococcus_like	4.174	138	0.1703	0.0966	0.3135	0.4196	3.231579	3.732584	3.938955
MICROBIOME_SAMPLE_00605	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Prevotella	3.96	210	0.0659	0.6438	0.1571	0.1333	4.438314	2.308579	2.908535
MICROBIOME_SAMPLE_00606	SSA_West	West	true	false	Male	56	High_fiber_plant_rich	Prevotella	4.963	158	0.0881	0.6615	0.0836	0.1668	3.77755	2.527616	3.295888
MICROBIOME_SAMPLE_00607	SSA_West	West	true	false	Female	58	High_fiber_plant_rich	Prevotella	3.753	215	0.0664	0.5896	0.1676	0.1764	4.592449	3.268329	3.209414
MICROBIOME_SAMPLE_00608	SSA_West	West	true	false	Female	55	Mixed_transition	Prevotella	3.745	131	0.0568	0.6678	0.1219	0.1535	4.229319	2.497706	2.388947
MICROBIOME_SAMPLE_00609	SSA_West	West	true	false	Female	31	Mixed_transition	Ruminococcus_like	4.781	230	0.1675	0.2456	0.2847	0.3023	3.168678	3.654111	3.072065
MICROBIOME_SAMPLE_00610	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	3.62	161	0.0365	0.6278	0.1933	0.1424	4.314209	2.836628	2.456625
MICROBIOME_SAMPLE_00611	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Prevotella	3.846	214	0.1205	0.6071	0.1339	0.1385	3.789453	2.15681	2.703152
MICROBIOME_SAMPLE_00612	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	4.481	189	0.1064	0.644	0.1117	0.138	4.184997	2.744187	3.484093
MICROBIOME_SAMPLE_00613	SSA_West	West	true	false	Female	34	Mixed_transition	Ruminococcus_like	4.648	163	0.1524	0.2473	0.2659	0.3344	3.557476	2.465729	3.141269
MICROBIOME_SAMPLE_00614	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	3.952	193	0.068	0.6485	0.1828	0.1006	3.708941	1.873811	2.548104
MICROBIOME_SAMPLE_00615	SSA_West	West	true	false	Female	41	Westernized_high_fat_sugar	Prevotella	3.476	170	0.0224	0.6539	0.1515	0.1722	3.152575	2.620221	2.510944
MICROBIOME_SAMPLE_00616	SSA_West	West	true	false	Female	36	High_fiber_plant_rich	Bacteroides	4.351	186	0.6063	0.0769	0.1371	0.1797	3.030143	4.204585	2.592101
MICROBIOME_SAMPLE_00617	SSA_West	West	true	false	Female	58	Mixed_transition	Prevotella	4.813	154	0.0139	0.7073	0.1271	0.1516	3.587677	3.345441	3.628727
MICROBIOME_SAMPLE_00618	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	4.492	188	0.0983	0.5997	0.1788	0.1232	3.861084	2.213388	2.976981
MICROBIOME_SAMPLE_00619	SSA_West	West	true	false	Female	43	Mixed_transition	Bacteroides	3.908	218	0.5747	0.0688	0.1928	0.1637	3.455295	3.77552	1.935416
MICROBIOME_SAMPLE_00620	SSA_West	West	true	false	Female	66	Mixed_transition	Prevotella	3.719	113	0.0945	0.5537	0.159	0.1928	3.688667	2.555028	2.740547
MICROBIOME_SAMPLE_00621	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	4.047	229	0.0737	0.6274	0.1876	0.1113	4.031494	2.633058	2.94794
MICROBIOME_SAMPLE_00622	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Bacteroides	4.019	211	0.6206	0.0781	0.161	0.1402	2.685161	3.597804	1.841521
MICROBIOME_SAMPLE_00623	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	4.157	163	0.05	0.6068	0.1682	0.175	4.010374	2.185337	2.222772
MICROBIOME_SAMPLE_00624	SSA_West	West	true	false	Female	43	High_fiber_plant_rich	Ruminococcus_like	3.653	191	0.1896	0.1415	0.2487	0.4201	2.937723	3.204103	3.458613
MICROBIOME_SAMPLE_00625	SSA_West	West	true	false	Female	55	Mixed_transition	Prevotella	4.193	212	0.0568	0.7159	0.101	0.1263	3.318525	2.10565	2.838166
MICROBIOME_SAMPLE_00626	SSA_West	West	true	false	Female	44	High_fiber_plant_rich	Bacteroides	3.862	136	0.586	0.0877	0.1835	0.1429	3.084406	3.420033	2.443784
MICROBIOME_SAMPLE_00627	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Ruminococcus_like	4.153	127	0.2042	0.2348	0.2487	0.3123	3.545703	3.785706	3.739493
MICROBIOME_SAMPLE_00628	SSA_West	West	true	false	Female	65	High_fiber_plant_rich	Bacteroides	4.262	157	0.6174	0.0852	0.1831	0.1142	2.759511	3.441962	2.699067
MICROBIOME_SAMPLE_00629	SSA_West	West	true	false	Female	39	Westernized_high_fat_sugar	Bacteroides	3.552	223	0.6075	0.1116	0.1274	0.1535	2.875252	3.88408	1.884501
MICROBIOME_SAMPLE_00630	SSA_West	West	true	false	Female	23	Mixed_transition	Prevotella	3.564	201	0.0789	0.6326	0.1596	0.1289	3.311168	2.584545	2.243034
MICROBIOME_SAMPLE_00631	SSA_West	West	true	false	Female	68	High_fiber_plant_rich	Bacteroides	4.354	167	0.6232	0.0543	0.1826	0.1399	2.907413	3.561924	2.507433
MICROBIOME_SAMPLE_00632	SSA_West	West	true	false	Female	78	High_fiber_plant_rich	Prevotella	3.73	215	0.0622	0.6429	0.139	0.1559	3.835463	2.084161	3.070743
MICROBIOME_SAMPLE_00633	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	4.127	142	0.0543	0.6097	0.1722	0.1637	3.975583	2.516029	2.864928
MICROBIOME_SAMPLE_00634	SSA_West	West	true	false	Female	29	High_fiber_plant_rich	Bacteroides	4.38	183	0.5504	0.0899	0.1862	0.1735	3.232663	3.864813	2.212004
MICROBIOME_SAMPLE_00635	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Ruminococcus_like	3.355	243	0.1438	0.2364	0.2537	0.3661	4.154019	2.867941	3.261227
MICROBIOME_SAMPLE_00636	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	3.968	171	0.0378	0.6735	0.1647	0.124	3.93502	2.962602	2.332188
MICROBIOME_SAMPLE_00637	SSA_West	West	true	false	Female	48	Mixed_transition	Prevotella	4.18	235	0.1148	0.6456	0.121	0.1185	3.770043	3.155703	2.746742
MICROBIOME_SAMPLE_00638	SSA_West	West	true	false	Female	38	High_fiber_plant_rich	Prevotella	3.637	191	0.0662	0.6768	0.1071	0.1499	4.619708	2.058785	3.258974
MICROBIOME_SAMPLE_00639	SSA_West	West	true	false	Female	56	Mixed_transition	Prevotella	3.779	123	0.1027	0.6428	0.109	0.1454	4.480684	2.942877	2.737684
MICROBIOME_SAMPLE_00640	SSA_West	West	true	false	Female	56	Westernized_high_fat_sugar	Bacteroides	4.406	263	0.5757	0.0546	0.2136	0.156	2.108893	3.752437	2.999971
MICROBIOME_SAMPLE_00641	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Ruminococcus_like	3.458	140	0.1554	0.1718	0.2854	0.3874	4.186446	2.704577	3.274404
MICROBIOME_SAMPLE_00642	SSA_West	West	true	false	Female	58	Mixed_transition	Prevotella	4.554	174	0.1175	0.561	0.1552	0.1662	3.455368	2.631053	1.809982
MICROBIOME_SAMPLE_00643	SSA_West	West	true	false	Female	73	High_fiber_plant_rich	Prevotella	4.327	216	0.0987	0.6376	0.1378	0.1259	3.970244	1.953599	2.815325
MICROBIOME_SAMPLE_00644	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Bacteroides	3.404	145	0.6306	0.082	0.2006	0.0867	2.694686	3.75101	2.129298
MICROBIOME_SAMPLE_00645	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	3.71	193	0.0792	0.6032	0.1672	0.1504	3.899236	3.345296	3.305031
MICROBIOME_SAMPLE_00646	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Bacteroides	5.087	156	0.5693	0.1059	0.1604	0.1645	2.895037	3.810157	2.283074
MICROBIOME_SAMPLE_00647	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Bacteroides	3.907	242	0.5783	0.124	0.155	0.1427	1.872975	4.647942	2.597612
MICROBIOME_SAMPLE_00648	SSA_West	West	true	false	Female	31	Mixed_transition	Ruminococcus_like	4.08	157	0.2385	0.0986	0.2729	0.3901	3.540875	3.896101	3.302092
MICROBIOME_SAMPLE_00649	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	4.102	206	0.0358	0.6933	0.1215	0.1493	4.096094	2.434135	2.726275
MICROBIOME_SAMPLE_00650	SSA_West	West	true	false	Female	46	Mixed_transition	Prevotella	5.012	184	0.0561	0.5934	0.2103	0.1403	4.446017	2.678664	3.783361
MICROBIOME_SAMPLE_00651	SSA_West	West	true	false	Female	70	Mixed_transition	Prevotella	4.844	222	0.0757	0.6151	0.1411	0.1681	4.098637	2.76078	3.110557
MICROBIOME_SAMPLE_00652	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Bacteroides	3.943	199	0.5907	0.0887	0.1633	0.1573	2.689007	3.573537	2.487209
MICROBIOME_SAMPLE_00653	SSA_West	West	true	false	Female	68	Mixed_transition	Prevotella	3.706	193	0.0521	0.597	0.2117	0.1392	4.578823	2.189204	3.579247
MICROBIOME_SAMPLE_00654	SSA_West	West	true	false	Female	38	Mixed_transition	Bacteroides	3.663	281	0.5895	0.0993	0.1627	0.1485	2.807088	4.343669	2.867282
MICROBIOME_SAMPLE_00655	SSA_West	West	true	false	Female	56	High_fiber_plant_rich	Prevotella	4.866	175	0.0214	0.71	0.132	0.1366	3.661237	2.39056	2.998967
MICROBIOME_SAMPLE_00656	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	4.498	209	0.1063	0.6082	0.1212	0.1643	4.109434	2.719191	3.188172
MICROBIOME_SAMPLE_00657	SSA_West	West	true	false	Female	40	Mixed_transition	Prevotella	4.047	160	0.0106	0.652	0.1554	0.182	4.318396	2.288155	2.627929
MICROBIOME_SAMPLE_00658	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	3.254	136	0.0995	0.6257	0.1478	0.1269	3.442808	2.335547	3.144736
MICROBIOME_SAMPLE_00659	SSA_West	West	true	false	Female	63	High_fiber_plant_rich	Prevotella	4.584	258	0.0605	0.7313	0.0861	0.122	4.08	2.61961	2.827346
MICROBIOME_SAMPLE_00660	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Ruminococcus_like	3.883	154	0.2136	0.1867	0.2743	0.3254	2.649605	3.033848	2.794525
MICROBIOME_SAMPLE_00661	SSA_West	West	true	false	Female	31	High_fiber_plant_rich	Prevotella	4.53	187	0.089	0.5919	0.1635	0.1555	3.679897	2.612145	3.335888
MICROBIOME_SAMPLE_00662	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Prevotella	4.171	209	0.0484	0.6228	0.16	0.1688	4.859903	2.666291	2.416367
MICROBIOME_SAMPLE_00663	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Prevotella	3.298	154	0.0611	0.7105	0.0798	0.1486	4.31242	1.266355	3.198703
MICROBIOME_SAMPLE_00664	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Ruminococcus_like	3.639	160	0.0991	0.1989	0.3285	0.3736	3.58882	3.041027	3.504007
MICROBIOME_SAMPLE_00665	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	4.616	176	0.0844	0.6025	0.1403	0.1729	3.709404	2.231381	2.589216
MICROBIOME_SAMPLE_00666	SSA_West	West	true	false	Female	31	Westernized_high_fat_sugar	Prevotella	3.822	248	0.1165	0.5996	0.0982	0.1856	4.188292	2.568289	2.942
MICROBIOME_SAMPLE_00667	SSA_West	West	true	false	Female	32	Mixed_transition	Ruminococcus_like	4.371	174	0.1906	0.1758	0.226	0.4076	3.437613	3.132259	3.622008
MICROBIOME_SAMPLE_00668	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	3.489	194	0.1926	0.186	0.3139	0.3075	2.8803	3.165739	3.505575
MICROBIOME_SAMPLE_00669	SSA_West	West	true	false	Female	44	Mixed_transition	Ruminococcus_like	4.717	205	0.1331	0.1968	0.299	0.371	3.738898	2.953625	4.241817
MICROBIOME_SAMPLE_00670	SSA_West	West	true	false	Female	22	Mixed_transition	Ruminococcus_like	4.468	244	0.2223	0.1855	0.2577	0.3345	2.223712	3.069693	3.244932
MICROBIOME_SAMPLE_00671	SSA_West	West	true	false	Female	59	Mixed_transition	Prevotella	4.055	256	0.0585	0.654	0.1137	0.1738	4.460594	2.162242	2.474407
MICROBIOME_SAMPLE_00672	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	4.504	170	0.079	0.6432	0.1494	0.1284	4.558439	2.515641	4.373004
MICROBIOME_SAMPLE_00673	SSA_West	West	true	false	Male	42	Mixed_transition	Prevotella	4.498	189	0.0935	0.6079	0.1436	0.155	3.782516	2.492732	2.35539
MICROBIOME_SAMPLE_00674	SSA_West	West	true	false	Female	36	High_fiber_plant_rich	Prevotella	3.605	145	0.1032	0.5922	0.1633	0.1413	3.832871	2.98661	3.271259
MICROBIOME_SAMPLE_00675	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Prevotella	4.385	153	0.0625	0.6178	0.1893	0.1303	3.430891	2.987857	3.190293
MICROBIOME_SAMPLE_00676	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Bacteroides	4.789	159	0.5904	0.1061	0.1503	0.1532	2.151332	4.033559	2.760852
MICROBIOME_SAMPLE_00677	SSA_West	West	true	false	Female	76	High_fiber_plant_rich	Ruminococcus_like	4.584	199	0.2366	0.112	0.2923	0.359	3.214459	3.377284	3.547979
MICROBIOME_SAMPLE_00678	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	3.476	158	0.0964	0.5852	0.1634	0.155	4.351682	2.533166	2.725597
MICROBIOME_SAMPLE_00679	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	3.25	234	0.0583	0.6535	0.1435	0.1446	3.474543	2.46069	3.137746
MICROBIOME_SAMPLE_00680	SSA_West	West	true	false	Female	48	Mixed_transition	Ruminococcus_like	4.458	215	0.199	0.1621	0.3085	0.3304	3.145066	2.477403	3.335199
MICROBIOME_SAMPLE_00681	SSA_West	West	true	false	Female	59	Mixed_transition	Prevotella	4.273	170	0.1041	0.6247	0.144	0.1272	4.296949	2.657377	3.420783
MICROBIOME_SAMPLE_00682	SSA_West	West	true	false	Female	57	Mixed_transition	Prevotella	3.928	245	0.0645	0.6102	0.1616	0.1638	3.70912	2.3013	2.561082
MICROBIOME_SAMPLE_00683	SSA_West	West	true	false	Female	64	High_fiber_plant_rich	Prevotella	3.634	190	0.0484	0.6565	0.1615	0.1336	4.032426	2.80551	2.830556
MICROBIOME_SAMPLE_00684	SSA_West	West	true	false	Female	44	High_fiber_plant_rich	Prevotella	3.904	248	0.1059	0.625	0.1252	0.1439	3.9022	2.082891	3.11291
MICROBIOME_SAMPLE_00685	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Bacteroides	3.97	142	0.6079	0.0668	0.1853	0.1399	2.437362	3.438143	2.615612
MICROBIOME_SAMPLE_00686	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	4.127	263	0.0871	0.634	0.1158	0.1631	3.592669	2.637938	3.258256
MICROBIOME_SAMPLE_00687	SSA_West	West	true	false	Female	59	Mixed_transition	Prevotella	4.469	201	0.0556	0.6565	0.1608	0.1272	4.120744	2.978241	3.285622
MICROBIOME_SAMPLE_00688	SSA_West	West	true	false	Female	66	High_fiber_plant_rich	Prevotella	3.885	172	0.028	0.6628	0.1655	0.1436	3.64907	2.426451	3.436706
MICROBIOME_SAMPLE_00689	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Bacteroides	4.919	284	0.6186	0.0714	0.1804	0.1295	2.939654	3.840587	2.748655
MICROBIOME_SAMPLE_00690	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	3.306	242	0.0993	0.6686	0.1543	0.0778	3.69956	2.297568	2.467461
MICROBIOME_SAMPLE_00691	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Prevotella	4.12	192	0.0886	0.6383	0.1478	0.1254	4.720131	1.767225	2.068463
MICROBIOME_SAMPLE_00692	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Bacteroides	4.167	151	0.6249	0.0408	0.1219	0.2124	2.542626	4.507833	2.243994
MICROBIOME_SAMPLE_00693	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Prevotella	4.452	199	0.0963	0.6372	0.108	0.1584	3.95876	2.089312	3.177591
MICROBIOME_SAMPLE_00694	SSA_West	West	true	false	Female	25	High_fiber_plant_rich	Prevotella	3.96	141	0.021	0.671	0.1746	0.1334	4.571117	2.31797	2.819596
MICROBIOME_SAMPLE_00695	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Ruminococcus_like	3.716	185	0.1692	0.1687	0.2864	0.3757	3.620669	2.99569	3.622002
MICROBIOME_SAMPLE_00696	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Ruminococcus_like	3.979	180	0.1867	0.1522	0.26	0.401	2.808419	3.612668	3.203117
MICROBIOME_SAMPLE_00697	SSA_West	West	true	false	Female	24	Mixed_transition	Prevotella	4.34	185	0.0665	0.6434	0.1479	0.1423	4.076407	1.835738	2.909058
MICROBIOME_SAMPLE_00698	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Bacteroides	4.109	280	0.6478	0.0805	0.1184	0.1533	3.315126	3.653808	1.988868
MICROBIOME_SAMPLE_00699	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Ruminococcus_like	4.432	180	0.149	0.1798	0.3006	0.3705	3.355182	2.785273	3.570039
MICROBIOME_SAMPLE_00700	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Ruminococcus_like	4.156	176	0.2016	0.2108	0.2872	0.3003	2.814092	2.745369	3.081474

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